FFCP PHASE1:Hg19::chr5:82373379..82373444,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7518 | |EntrezGene=7518 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12831 | |HGNC=12831 | ||
|TSSclassifier=strong | |||
|UniProt=F5H0F2 | |UniProt=F5H0F2 | ||
|association_with_transcript=0bp_to_ENST00000396027,ENST00000511817,ENST00000514538_5end | |association_with_transcript=0bp_to_ENST00000396027,ENST00000511817,ENST00000514538_5end | ||
|cluster_id=chr5:82373379..82373444,+ | |||
|description=CAGE_peak_1_at_XRCC4_5end | |description=CAGE_peak_1_at_XRCC4_5end | ||
|id=chr5:82373379..82373444,+ | |id=chr5:82373379..82373444,+ | ||
|ontology_enrichment_celltype=CL:0000037!3.72e-12!172;CL:0000566!3.72e-12!172;CL:0002032!7.38e-12!165;CL:0000837!7.38e-12!165;CL:0000988!5.16e-11!182;CL:0000763!1.04e-09!112;CL:0000049!1.04e-09!112;CL:0000738!5.89e-08!140;CL:0002031!6.27e-07!124;CL:0002087!9.81e-07!119 | |ontology_enrichment_celltype=CL:0000037!3.72e-12!172;CL:0000566!3.72e-12!172;CL:0002032!7.38e-12!165;CL:0000837!7.38e-12!165;CL:0000988!5.16e-11!182;CL:0000763!1.04e-09!112;CL:0000049!1.04e-09!112;CL:0000738!5.89e-08!140;CL:0002031!6.27e-07!124;CL:0002087!9.81e-07!119 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.51e-12,168;CL:0002032,4.91e-12,161;CL:0000837,4.91e-12,161;CL:0000988,1.42e-11,177;CL:0000763,6.03e-10,108;CL:0000049,6.03e-10,108;CL:0000738,4.31e-08,136;CL:0002031,4.62e-07,120;CL:0002087,7.07e-07,115 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!8.10e-21!235;DOID:14566!2.67e-20!239;DOID:2531!5.95e-12!51;DOID:0060083!5.95e-12!51;DOID:0050686!4.94e-11!137;DOID:0050687!2.88e-10!143;DOID:305!5.53e-10!106;DOID:1240!1.64e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:2531;9.46e-08;51!DOID:0060083;9.46e-08;51!DOID:1240;1.66e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:162,8.64e-21,235;DOID:14566,2.98e-20,239;DOID:2531,5.91e-12,51;DOID:0060083,5.91e-12,51;DOID:0050686,5.11e-11,137;DOID:0050687,3.05e-10,143;DOID:305,5.74e-10,106;DOID:1240,1.63e-08,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@XRCC4 | |short_description=p1@XRCC4 | ||
}} | }} |
Latest revision as of 00:26, 19 September 2015
Short description: | p1@XRCC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_XRCC4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000396027, ENST00000511817, ENST00000514538_5end |
EntrezGene: | XRCC4 |
HGNC: | 12831 |
UniProt: | F5H0F2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.51e-12 | 168 |
hematopoietic oligopotent progenitor cell | 4.91e-12 | 161 |
hematopoietic multipotent progenitor cell | 4.91e-12 | 161 |
hematopoietic cell | 1.42e-11 | 177 |
myeloid cell | 6.03e-10 | 108 |
common myeloid progenitor | 6.03e-10 | 108 |
leukocyte | 4.31e-08 | 136 |
hematopoietic lineage restricted progenitor cell | 4.62e-07 | 120 |
nongranular leukocyte | 7.07e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
cancer | 8.64e-21 | 235 |
disease of cellular proliferation | 2.98e-20 | 239 |
hematologic cancer | 5.91e-12 | 51 |
immune system cancer | 5.91e-12 | 51 |
organ system cancer | 5.11e-11 | 137 |
cell type cancer | 3.05e-10 | 143 |
carcinoma | 5.74e-10 | 106 |
leukemia | 1.63e-08 | 39 |