FFCP PHASE1:Hg19::chr6:152489465..152489470,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23345 | |EntrezGene=23345 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17089 | |HGNC=17089 | ||
|TSSclassifier=strong | |||
|UniProt=F8WAI0 | |UniProt=F8WAI0 | ||
|association_with_transcript=15bp_to_ENST00000354674_5end | |association_with_transcript=15bp_to_ENST00000354674_5end | ||
|cluster_id=chr6:152489465..152489470,- | |||
|coexpression_cluster_id=C56 | |||
|description=CAGE_peak_61_at_SYNE1_5end | |description=CAGE_peak_61_at_SYNE1_5end | ||
|id=chr6:152489465..152489470,- | |id=chr6:152489465..152489470,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;9.37e-99;1!UBERON:0005062;7.14e-26;4!UBERON:0007284;7.14e-26;4!UBERON:0004872;1.65e-15;7 | |||
|ontology_enrichment_disease=DOID:178!3.28e-11!1;DOID:326!3.28e-11!1;DOID:3978!3.28e-11!1;DOID:3394!3.28e-11!1;DOID:5844!3.28e-11!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003978!1.23e-14!3;UBERON:0009751!1.23e-14!3;UBERON:0000946!1.23e-14!3;UBERON:0002523!1.23e-14!3;UBERON:0005983!1.23e-14!3;UBERON:0002165!1.23e-14!3;UBERON:0002062!1.23e-14!3;UBERON:0007280!1.23e-14!3;UBERON:0007100!4.49e-13!27;UBERON:0002146!9.57e-12!1;UBERON:0005623!9.57e-12!1;UBERON:0007029!1.06e-11!1;UBERON:0002426!1.31e-11!1;UBERON:0003831!1.31e-11!1;UBERON:0003898!1.31e-11!1;UBERON:0004830!1.31e-11!1;UBERON:0001774!1.31e-11!1;UBERON:0003830!1.31e-11!1;UBERON:0005175!1.31e-11!1;UBERON:0003897!1.31e-11!1;UBERON:0001103!1.31e-11!1;UBERON:0010084!1.31e-11!1;UBERON:0002079!1.45e-11!1;UBERON:0002135!1.78e-11!1;UBERON:0001736!2.42e-11!1;UBERON:0006298!2.42e-11!1;UBERON:0001301!5.43e-11!1;UBERON:0003103!1.50e-10!69;UBERON:0007023!7.85e-09!115;UBERON:0000948!4.74e-07!24;UBERON:0005498!4.74e-07!24;UBERON:0004140!4.74e-07!24;UBERON:0009881!4.74e-07!24;UBERON:0004141!4.74e-07!24;UBERON:0003084!4.74e-07!24;UBERON:0007005!4.74e-07!24;UBERON:0004139!4.74e-07!24;UBERON:0004291!4.74e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0002146;2.55e-98;1!UBERON:0005623;2.55e-98;1!UBERON:0003978;5.96e-34;3!UBERON:0000946;5.96e-34;3!UBERON:0000948;3.41e-19;22!UBERON:0007100;4.64e-17;25!UBERON:0010313;3.02e-11;10!UBERON:0003103;1.57e-09;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002146,2.55e-98,1;UBERON:0005623,2.55e-98,1;UBERON:0003978,5.96e-34,3;UBERON:0009751,5.96e-34,3;UBERON:0000946,5.96e-34,3;UBERON:0002523,5.96e-34,3;UBERON:0005983,5.96e-34,3;UBERON:0002165,5.96e-34,3;UBERON:0002062,5.96e-34,3;UBERON:0007280,5.96e-34,3;UBERON:0000948,1.03e-17,24;UBERON:0005498,1.03e-17,24;UBERON:0004140,1.03e-17,24;UBERON:0009881,1.03e-17,24;UBERON:0004141,1.03e-17,24;UBERON:0003084,1.03e-17,24;UBERON:0007005,1.03e-17,24;UBERON:0004139,1.03e-17,24;UBERON:0004291,1.03e-17,24;UBERON:0007100,6.71e-16,27;UBERON:0004797,1.91e-15,7;UBERON:0010313,3.02e-11,10;UBERON:0002342,3.02e-11,10;UBERON:0005062,3.02e-11,10;UBERON:0003103,4.47e-07,68 | |||
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|short_description=p61@SYNE1 | |short_description=p61@SYNE1 | ||
}} | }} |
Latest revision as of 06:16, 16 September 2015
Short description: | p61@SYNE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_61_at_SYNE1_5end |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | 15bp_to_ENST00000354674_5end |
EntrezGene: | SYNE1 |
HGNC: | 17089 |
UniProt: | F8WAI0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pulmonary valve | 2.55e-98 | 1 |
semi-lunar valve | 2.55e-98 | 1 |
valve | 5.96e-34 | 3 |
cardiac mesenchyme | 5.96e-34 | 3 |
cardial valve | 5.96e-34 | 3 |
tunica intima | 5.96e-34 | 3 |
heart layer | 5.96e-34 | 3 |
endocardium | 5.96e-34 | 3 |
endocardial cushion | 5.96e-34 | 3 |
presumptive endocardium | 5.96e-34 | 3 |
heart | 1.03e-17 | 24 |
primitive heart tube | 1.03e-17 | 24 |
primary heart field | 1.03e-17 | 24 |
anterior lateral plate mesoderm | 1.03e-17 | 24 |
heart tube | 1.03e-17 | 24 |
heart primordium | 1.03e-17 | 24 |
cardiac mesoderm | 1.03e-17 | 24 |
cardiogenic plate | 1.03e-17 | 24 |
heart rudiment | 1.03e-17 | 24 |
primary circulatory organ | 6.71e-16 | 27 |
blood vessel layer | 1.91e-15 | 7 |
neural crest-derived structure | 3.02e-11 | 10 |
neural crest | 3.02e-11 | 10 |
neural fold | 3.02e-11 | 10 |
compound organ | 4.47e-07 | 68 |