FFCP PHASE1:Hg19::chr20:25227346..25227383,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:25227346..25227383,+ | |||
|coexpression_cluster_id=C62 | |||
|description=CAGE_peak_at_chr20:25227346..25227383,+ | |description=CAGE_peak_at_chr20:25227346..25227383,+ | ||
|id=chr20:25227346..25227383,+ | |id=chr20:25227346..25227383,+ | ||
|ontology_enrichment_celltype=CL:0002549!7.80e-09!2 | |ontology_enrichment_celltype=CL:0002549!7.80e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.03e-17;24!CL:0002092;3.02e-11;10!CL:0000542;3.52e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.03e-17,24;CL:0000826,1.03e-17,24;CL:0002092,3.02e-11,10;CL:0000838,6.99e-09,52;CL:0000542,9.74e-09,53;CL:0000051,9.74e-09,53 | |||
|ontology_enrichment_development_v019=CL:0000051;3.52e-08;53 | |||
|ontology_enrichment_disease=DOID:3493!6.28e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:4960;2.55e-98;1!DOID:0070004;2.55e-98;1!DOID:0060058;2.73e-11;10!DOID:2531;7.93e-07;51!DOID:0060083;7.93e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,2.55e-98,1;DOID:0070004,2.55e-98,1;DOID:0060058,2.73e-11,10;DOID:2531,4.95e-09,51;DOID:0060083,4.95e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0003947!7.80e-09!2;UBERON:0005629!7.80e-09!2;UBERON:0005358!7.80e-09!2;UBERON:0001886!7.80e-09!2;UBERON:0004086!7.80e-09!2;UBERON:0005282!7.80e-09!2;UBERON:0005281!7.80e-09!2;UBERON:0005284!1.21e-07!5;UBERON:0001155!4.29e-07!9;UBERON:0005409!6.54e-07!35 | |ontology_enrichment_uberon=UBERON:0003947!7.80e-09!2;UBERON:0005629!7.80e-09!2;UBERON:0005358!7.80e-09!2;UBERON:0001886!7.80e-09!2;UBERON:0004086!7.80e-09!2;UBERON:0005282!7.80e-09!2;UBERON:0005281!7.80e-09!2;UBERON:0005284!1.21e-07!5;UBERON:0001155!4.29e-07!9;UBERON:0005409!6.54e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0002371;1.33e-09;12!UBERON:0001474;7.60e-07;18 | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr20:25227346..25227383,+ | |short_description=p@chr20:25227346..25227383,+ | ||
}} | }} |
Latest revision as of 12:41, 28 July 2015
Short description: | p@chr20:25227346..25227383, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:25227346..25227383, + |
Coexpression cluster: | C62_Burkitt_tonsil_CD19_submaxillary_spleen_salivary_lymph |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.03e-17 | 24 |
pro-B cell | 1.03e-17 | 24 |
bone marrow cell | 3.02e-11 | 10 |
lymphoid lineage restricted progenitor cell | 6.99e-09 | 52 |
lymphocyte | 9.74e-09 | 53 |
common lymphoid progenitor | 9.74e-09 | 53 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 2.55e-98 | 1 |
myeloma | 2.55e-98 | 1 |
lymphoma | 2.73e-11 | 10 |
hematologic cancer | 4.95e-09 | 51 |
immune system cancer | 4.95e-09 | 51 |