FFCP PHASE1:Hg19::chr20:35177756..35177772,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:35177756..35177772,+ | |||
|coexpression_cluster_id=C384 | |||
|description=CAGE_peak_at_chr20:35177756..35177772,+ | |description=CAGE_peak_at_chr20:35177756..35177772,+ | ||
|id=chr20:35177756..35177772,+ | |id=chr20:35177756..35177772,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.86e-21!180;CL:0000057!1.01e-13!75;CL:0000192!1.34e-11!42;CL:0000514!1.34e-11!42;CL:0000680!4.04e-11!57;CL:0000056!4.04e-11!57;CL:0000355!4.04e-11!57;CL:0000183!8.24e-11!59;CL:0000359!1.40e-10!32;CL:0000187!2.55e-10!54;CL:0000393!2.57e-10!60;CL:0000211!2.57e-10!60;CL:0000136!8.52e-09!15 | |ontology_enrichment_celltype=CL:0000055!2.86e-21!180;CL:0000057!1.01e-13!75;CL:0000192!1.34e-11!42;CL:0000514!1.34e-11!42;CL:0000680!4.04e-11!57;CL:0000056!4.04e-11!57;CL:0000355!4.04e-11!57;CL:0000183!8.24e-11!59;CL:0000359!1.40e-10!32;CL:0000187!2.55e-10!54;CL:0000393!2.57e-10!60;CL:0000211!2.57e-10!60;CL:0000136!8.52e-09!15 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.08e-10;32!CL:0000136;1.34e-08;13!CL:0000192;2.22e-08;43!CL:0002334;8.63e-08;12!CL:0000134;2.10e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,2.16e-12,43;CL:0000514,2.16e-12,43;CL:0000359,9.45e-11,32;CL:0000136,8.09e-10,15;CL:0000057,2.48e-09,76;CL:0000680,1.05e-08,58;CL:0000056,1.05e-08,58;CL:0000355,1.05e-08,58;CL:0000187,2.80e-08,55;CL:0002334,6.35e-08,12;CL:0000393,3.83e-07,61;CL:0000211,3.83e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000514;2.22e-08;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.83e-13!143;UBERON:0000914!9.39e-13!83;UBERON:0002329!9.39e-13!83;UBERON:0003077!9.39e-13!83;UBERON:0003059!9.39e-13!83;UBERON:0007282!9.39e-13!83;UBERON:0009618!9.39e-13!83;UBERON:0007285!9.39e-13!83;UBERON:0004290!6.10e-12!70;UBERON:0000486!1.87e-11!82;UBERON:0002385!3.72e-11!63;UBERON:0001015!3.72e-11!63;UBERON:0000383!3.72e-11!63;UBERON:0001134!2.56e-10!61;UBERON:0002036!2.56e-10!61;UBERON:0003082!2.56e-10!61;UBERON:0002100!3.26e-10!216;UBERON:0004872!4.35e-09!84;UBERON:0003104!1.62e-08!238;UBERON:0009142!1.62e-08!238;UBERON:0001009!3.34e-08!113;UBERON:0000481!3.38e-08!347;UBERON:0003102!4.65e-08!95;UBERON:0000468!5.95e-08!659;UBERON:0001637!1.02e-07!42;UBERON:0003509!1.02e-07!42;UBERON:0004572!1.02e-07!42;UBERON:0001981!1.24e-07!60;UBERON:0007500!1.24e-07!60;UBERON:0004537!1.24e-07!60;UBERON:0006965!1.24e-07!60;UBERON:0004535!2.02e-07!110;UBERON:0000926!4.24e-07!448;UBERON:0004120!4.24e-07!448;UBERON:0006603!4.24e-07!448;UBERON:0003914!6.17e-07!118;UBERON:0007100!6.70e-07!27 | |ontology_enrichment_uberon=UBERON:0005256!1.83e-13!143;UBERON:0000914!9.39e-13!83;UBERON:0002329!9.39e-13!83;UBERON:0003077!9.39e-13!83;UBERON:0003059!9.39e-13!83;UBERON:0007282!9.39e-13!83;UBERON:0009618!9.39e-13!83;UBERON:0007285!9.39e-13!83;UBERON:0004290!6.10e-12!70;UBERON:0000486!1.87e-11!82;UBERON:0002385!3.72e-11!63;UBERON:0001015!3.72e-11!63;UBERON:0000383!3.72e-11!63;UBERON:0001134!2.56e-10!61;UBERON:0002036!2.56e-10!61;UBERON:0003082!2.56e-10!61;UBERON:0002100!3.26e-10!216;UBERON:0004872!4.35e-09!84;UBERON:0003104!1.62e-08!238;UBERON:0009142!1.62e-08!238;UBERON:0001009!3.34e-08!113;UBERON:0000481!3.38e-08!347;UBERON:0003102!4.65e-08!95;UBERON:0000468!5.95e-08!659;UBERON:0001637!1.02e-07!42;UBERON:0003509!1.02e-07!42;UBERON:0004572!1.02e-07!42;UBERON:0001981!1.24e-07!60;UBERON:0007500!1.24e-07!60;UBERON:0004537!1.24e-07!60;UBERON:0006965!1.24e-07!60;UBERON:0004535!2.02e-07!110;UBERON:0000926!4.24e-07!448;UBERON:0004120!4.24e-07!448;UBERON:0006603!4.24e-07!448;UBERON:0003914!6.17e-07!118;UBERON:0007100!6.70e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;5.24e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,1.66e-09,122;UBERON:0003104,7.92e-09,160;UBERON:0009142,7.92e-09,160;UBERON:0004872,1.71e-08,83;UBERON:0002385,1.77e-08,64;UBERON:0001015,1.77e-08,64;UBERON:0000383,1.77e-08,64;UBERON:0001637,2.87e-08,42;UBERON:0003509,2.87e-08,42;UBERON:0004572,2.87e-08,42;UBERON:0000926,4.77e-08,315;UBERON:0004120,4.77e-08,315;UBERON:0006603,4.77e-08,315;UBERON:0007100,6.51e-08,27;UBERON:0007524,1.27e-07,73;UBERON:0001134,1.49e-07,62;UBERON:0002036,1.49e-07,62;UBERON:0003082,1.49e-07,62;UBERON:0007500,1.74e-07,59;UBERON:0001981,1.74e-07,59;UBERON:0004537,1.74e-07,59;UBERON:0006965,1.74e-07,59;UBERON:0002329,2.31e-07,71;UBERON:0003059,2.31e-07,71;UBERON:0007282,2.31e-07,71;UBERON:0004290,2.31e-07,71;UBERON:0009618,2.31e-07,71;UBERON:0001009,3.47e-07,112;UBERON:0003077,3.96e-07,72;UBERON:0007285,3.96e-07,72;UBERON:0007503,4.11e-07,78;UBERON:0003914,9.23e-07,117 | |||
|phase1_expression=4.72363786103447,11.9896293378951,3.52386010239928,23.01685862122,25.0298212879281,18.3191090061077,17.7309914717817,0.631719873426831,2.08948502559871,0.737201809504527,11.8626198555313,0,0.527533956456907,0.247532705920093,1.98838425436749,12.7741777825837,7.8350288643117,5.11217063271161,3.90346239032406,0.246242116153576,0.612002073732759,0.940364164434263,0.572471974262113,0.136874425072884,1.25542639594803,0,0,0,0,0,0,0,0,0.739508020333575,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,1.80719576192283,4.01070328508712,2.17269778441236,0,1.45990461090791,0.567208902984407,3.54767035940102,1.05401742831751,0.785874452986276,0,0.370784442784429,0.324547393654683,0,0.26591592103773,0,0,0,0,0,0,0,0,0.825354125820202,0.417989933073621,0.258416759169329,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0,3.47880366186723,2.15271869829786,0.926864265692532,1.14734648299525,2.83734705758686,4.48542080113846,3.20246987189115,10.853372130355,0,0.942974704487816,1.14423332179421,0.302714855289863,0.576175924479999,0.234321431833797,0.312160076830321,0.570471821544449,0.448346041655403,0.587172493218824,0.485618833104395,0.280901613404497,0.204154171254893,0.859840221182376,0.413303124703062,5.94001428641027,10.6324779589779,0,2.15585442544872,0,0.250237039743928,0.277064115484183,0.877955241761676,9.80760946556863,5.55880817954408,1.58805056424029,1.61450672119976,2.34913127700424,2.11931901159562,0.900273288253207,1.54578793857658,0.772921620136887,2.60563598864226,0.168776332241266,3.02054715999716,2.01947019395292,2.57739716198438,1.61646056818812,5.32514388774922,5.13835700960965,2.20428770003634,0.193260853163297,0.272746120590835,0,0.731842236777572,0.132529768321485,0.929551542956147,0.829288440122964,0.252320850875628,0.72995471815166,1.56449532329816,7.71889125831462,5.52539685409922,4.64367928031979,3.60939740834793,0.354920400119532,0.505754070234305,0.482022059766964,0.661763836394364,0,0,0.539325232640658,0.784885860501384,0,1.4763109092493,2.80483547606892,0.8231480226628,4.41026134156626,0,0,1.77236972004421,0,0,0,0,0,0,0,0,0,1.44331342025273,0.115930404975077,0.469634776943287,0,0,0,0,0,0,0,0.148631162288728,0,0.335964256397719,0,0,0,0.383382679165211,0,0,0,0.144119953416961,0,0,0,0,1.71072446022705,0,0,0,0,0,0.36669142910475,1.16344544182,3.57656445851882,0.845302752556,4.78688609852767,7.28052058379563,0.257207374262142,0,0.266422179016099,1.85871391755592,1.08524321078289,0,0.325736184293735,1.06617584622764,0.791951872933429,1.80863626235752,0,3.19913571782583,0,0,0,3.35474797688216,8.04033550838797,0,1.73737568001095,2.05476322550383,0.895304816199478,0,0,0,0,0,0,0,0.167516265334349,1.27587750330633,0,0,0,0.24538298343828,2.00068208423871,2.17012018959788,7.90289273817067,15.8801800029474,5.04647728108591,1.99140405487612,1.20378439891088,25.0148254461583,2.0694614258501,0,2.94990669666725,2.86715927744673,0.979005787313703,2.05886054286514,0.206768026122887,0,0.106727557803444,0,0,0,1.98486246255021,1.38115775959256,11.507063871756,1.79394808957981,2.55853624533352,7.72098821489316,4.45254199334973,2.46735510084249,2.30830242907065,0.410635780069046,5.19254429183621,3.48631135379878,0,0.601519410909855,0.0920809889358963,2.18147451512753,4.91646153618136,9.30983346211911,0,0.231046011313244,0,0,0.105551628892876,0,0,0.215915916102139,0,0.541892875087706,2.50844886927427,0,0.831076008928724,0.447749509444357,0,0,0,0.328014645699706,0,0.309123034943167,0.183138929636687,0,0,0,4.82051789532479,0.290012154876366,1.23238893691716,0.614014698904518,0.275673144969061,0.537101224341368,0.435050081742686,0.170453254832202,0.356128142586949,0,0.384380134730212,0.127612712494584,0.2023155617111,8.83206543664843,1.25924938732256,0,0,0.532306030317022,0.869932992075073,1.8532421910392,1.43124886741991,1.116475108079,0.949138274156178,3.43134349062885,0,0,0.318203247925937,7.8494864019923,1.2591072030832,1.37268514868027,1.41374882814824,1.41527737101321,1.58510321173008,1.26377536871694,1.95053495635836,1.70599442741899,12.6780176108107,2.18399858252777,2.40389234321312,3.39024349860728,0.551365343546124,1.99031692572366,6.57676327880644,0,1.9676842561399,2.63783490051515,4.957175969596,2.81695602532241,0.143411352204052,1.57198465620994,4.63672366925625,1.06428319221179,1.68886108238131,3.29294892959902,0,0,0.0962221127255121,0,1.08890984861323,0.659006605437454,0.43050537267123,0,0.886860307073351,0.459446800413919,0,0.764637207142375,1.70894156152249,0,0.411362273086194,0,0.540031437238115,2.37937552888281,0.534120355637366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500547425135725,0,0,0,0,0,0,0,1.17206543417515,0.970884173996107,0,0,0,0,0,0,0,0.222617410045812,0,0,15.5413430835834,1.93398740871803,0,0,0,10.8863855681633,0,0,0,13.2182163553491,0,2.22273980289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| ||
|short_description=p@chr20:35177756..35177772,+ | |short_description=p@chr20:35177756..35177772,+ | ||
}} | }} |
Latest revision as of 13:36, 28 July 2015
Short description: | p@chr20:35177756..35177772, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:35177756..35177772, + |
Coexpression cluster: | C384_Adipocyte_smooth_bladder_left_aorta_Osteoblast_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 2.16e-12 | 43 |
smooth muscle myoblast | 2.16e-12 | 43 |
vascular associated smooth muscle cell | 9.45e-11 | 32 |
fat cell | 8.09e-10 | 15 |
fibroblast | 2.48e-09 | 76 |
muscle precursor cell | 1.05e-08 | 58 |
myoblast | 1.05e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.05e-08 | 58 |
muscle cell | 2.80e-08 | 55 |
preadipocyte | 6.35e-08 | 12 |
electrically responsive cell | 3.83e-07 | 61 |
electrically active cell | 3.83e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
trunk mesenchyme | 1.66e-09 | 122 |
mesenchyme | 7.92e-09 | 160 |
entire embryonic mesenchyme | 7.92e-09 | 160 |
splanchnic layer of lateral plate mesoderm | 1.71e-08 | 83 |
muscle tissue | 1.77e-08 | 64 |
musculature | 1.77e-08 | 64 |
musculature of body | 1.77e-08 | 64 |
artery | 2.87e-08 | 42 |
arterial blood vessel | 2.87e-08 | 42 |
arterial system | 2.87e-08 | 42 |
mesoderm | 4.77e-08 | 315 |
mesoderm-derived structure | 4.77e-08 | 315 |
presumptive mesoderm | 4.77e-08 | 315 |
primary circulatory organ | 6.51e-08 | 27 |
dense mesenchyme tissue | 1.27e-07 | 73 |
skeletal muscle tissue | 1.49e-07 | 62 |
striated muscle tissue | 1.49e-07 | 62 |
myotome | 1.49e-07 | 62 |
epithelial tube open at both ends | 1.74e-07 | 59 |
blood vessel | 1.74e-07 | 59 |
blood vasculature | 1.74e-07 | 59 |
vascular cord | 1.74e-07 | 59 |
somite | 2.31e-07 | 71 |
presomitic mesoderm | 2.31e-07 | 71 |
presumptive segmental plate | 2.31e-07 | 71 |
dermomyotome | 2.31e-07 | 71 |
trunk paraxial mesoderm | 2.31e-07 | 71 |
circulatory system | 3.47e-07 | 112 |
paraxial mesoderm | 3.96e-07 | 72 |
presumptive paraxial mesoderm | 3.96e-07 | 72 |
epithelial vesicle | 4.11e-07 | 78 |
epithelial tube | 9.23e-07 | 117 |