FFCP PHASE1:Hg19::chr13:21918947..21918951,-: Difference between revisions
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|id=chr13:21918947..21918951,-
|short_description=p1@LINC00422
|description=CAGE_peak_1_at_LINC00422_5end
|association_with_transcript=32bp_to_ENST00000423575_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=42757 | |HGNC=42757 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=32bp_to_ENST00000423575_5end | |||
|cluster_id=chr13:21918947..21918951,- | |||
|coexpression_cluster_id=C2256 | |||
|description=CAGE_peak_1_at_LINC00422_5end | |||
|id=chr13:21918947..21918951,- | |||
|ontology_enrichment_celltype=CL:0000037!1.61e-28!172;CL:0000566!1.61e-28!172;CL:0002032!1.89e-27!165;CL:0000837!1.89e-27!165;CL:0000988!3.37e-26!182;CL:0000084!1.84e-22!25;CL:0000827!1.84e-22!25;CL:0000838!7.80e-16!52;CL:0000542!1.98e-15!53;CL:0000051!1.98e-15!53;CL:0000791!4.19e-15!18;CL:0000789!4.19e-15!18;CL:0002420!4.19e-15!18;CL:0002419!4.19e-15!18;CL:0000790!4.19e-15!18;CL:0000738!3.94e-14!140;CL:0002087!1.53e-13!119;CL:0000763!9.62e-13!112;CL:0000049!9.62e-13!112;CL:0002031!9.76e-12!124;CL:0000625!9.42e-11!11;CL:0000898!1.83e-08!3;CL:0000767!2.30e-08!3;CL:0000134!1.77e-07!358;CL:0002320!4.19e-07!365;CL:0000624!5.35e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000037;1.25e-11;1!CL:0001024;1.25e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,3.23e-12,108;CL:0000049,3.23e-12,108;CL:0000037,7.35e-12,168;CL:0001024,1.07e-11,1;CL:0000988,3.80e-11,177;CL:0002032,1.03e-10,161;CL:0000837,1.03e-10,161 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1240!6.21e-23!39;DOID:2531!6.39e-20!51;DOID:0060083!6.39e-20!51;DOID:8692!6.37e-17!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;9.35e-46;31!DOID:1240;6.20e-44;39!DOID:2531;3.79e-27;51!DOID:0060083;3.79e-27;51!DOID:9119;2.77e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,7.05e-51,39;DOID:8692,3.13e-47,31;DOID:2531,1.81e-38,51;DOID:0060083,1.81e-38,51;DOID:0050686,6.03e-13,137;DOID:9119,2.93e-12,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@LINC00422 | |||
}} | }} |
Latest revision as of 19:54, 16 September 2015
Short description: | p1@LINC00422 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LINC00422_5end |
Coexpression cluster: | C2256_acute_CD133_CD34_non_chronic_small_CD4 |
Association with transcript: | 32bp_to_ENST00000423575_5end |
EntrezGene: | NA |
HGNC: | 42757 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 3.23e-12 | 108 |
common myeloid progenitor | 3.23e-12 | 108 |
hematopoietic stem cell | 7.35e-12 | 168 |
CD34-positive, CD38-negative hematopoietic stem cell | 1.07e-11 | 1 |
hematopoietic cell | 3.80e-11 | 177 |
hematopoietic oligopotent progenitor cell | 1.03e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.03e-10 | 161 |
Ontology term | p-value | n |
---|---|---|
leukemia | 7.05e-51 | 39 |
myeloid leukemia | 3.13e-47 | 31 |
hematologic cancer | 1.81e-38 | 51 |
immune system cancer | 1.81e-38 | 51 |
organ system cancer | 6.03e-13 | 137 |
acute myeloid leukemia | 2.93e-12 | 1 |