FFCP PHASE1:Hg19::chr6:72970412..72970435,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22999 | |EntrezGene=22999 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17282 | |HGNC=17282 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=4bp_to_uc011dyf.1_5end | |association_with_transcript=4bp_to_uc011dyf.1_5end | ||
|cluster_id=chr6:72970412..72970435,+ | |||
|coexpression_cluster_id=C1926 | |||
|description=CAGE_peak_11_at_RIMS1_5end | |description=CAGE_peak_11_at_RIMS1_5end | ||
|id=chr6:72970412..72970435,+ | |id=chr6:72970412..72970435,+ | ||
|ontology_enrichment_celltype=CL:0002590!1.44e-08!3;CL:0002618!1.14e-07!3;CL:0002150!1.62e-07!3;CL:0000861!1.62e-07!3 | |ontology_enrichment_celltype=CL:0002590!1.44e-08!3;CL:0002618!1.14e-07!3;CL:0002150!1.62e-07!3;CL:0000861!1.62e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002590;1.29e-21;3!CL:0000222;5.53e-17;1!CL:0002549;6.93e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002590,1.29e-21,3;CL:0002549,7.49e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;1.93e-16;1!DOID:4231;3.43e-09;2!DOID:1907;3.43e-09;2!DOID:3451;6.93e-09;2!DOID:4159;6.93e-09;2!DOID:0060122;6.93e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,1.41e-16,1;DOID:4231,3.43e-09,2;DOID:1907,3.43e-09,2;DOID:3451,5.94e-09,2;DOID:4159,5.94e-09,2;DOID:0060122,5.94e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0005284!2.22e-13!5;UBERON:0002066!1.58e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0005284;3.34e-28;5!UBERON:0007195;1.93e-16;1!UBERON:0006876;3.34e-13;11!UBERON:0005629;6.93e-09;2!UBERON:0005358;6.93e-09;2!UBERON:0001886;6.93e-09;2!UBERON:0004086;6.93e-09;2!UBERON:0005282;6.93e-09;2!UBERON:0005281;6.93e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005284,3.66e-28,5;UBERON:0007195,2.63e-16,1;UBERON:0006876,3.48e-13,11;UBERON:0005629,7.49e-09,2;UBERON:0005358,7.49e-09,2;UBERON:0001886,7.49e-09,2;UBERON:0004086,7.49e-09,2;UBERON:0005282,7.49e-09,2;UBERON:0005281,7.49e-09,2 | |||
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|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0.33472061276467,0,0,0,0,0,0.267899184852239,0.22452937262617,0.225222960966644,0,0,0,0,0,0,0,0.25326102332916,0,0,0,0,0,1.48000529050296,0,0,0,0.756787138224657,1.15235184896,0,0,0,0,0,0,0,0.61246251376468,0.61417158655884,0,0,0,0,0,0.505008341862199,0.500474079487857,0.277064115484183,0,0,0.150238058906597,0.113432183160021,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0.577465791044295,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.36669142910475,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27174682081482,0,0,1.59259437334337,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10422342547226,0.500170521059677,0,0,0,0,0.117141414992713,0.601892199455438,0,0,0,0.553107505625109,0.260650843404249,0.587403472388222,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286249773483982,4.46590043231601,9.49138274156178,0.190630193923825,0,0,0,0,0,0,0,0.606547444719948,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0.281695602532241,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55519793830904,0,0,0,0,0,1.11136990144637,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0.664653872707185,0,0,0,0,0,0,0,0,0,0,0.290268993867255,0.219267951258557,0.164230914106418,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0.50313580350515,0,0,0,0,0,0,0,0,0.414706207840855,0.265841714557995,0,0,0,0,0,0,0,0,2.00013882331577,0,0,11.3566408405786,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.1331221891066,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0.818859587550484,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0.313972371402056,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p11@RIMS1 | |short_description=p11@RIMS1 | ||
}} | }} |
Latest revision as of 16:50, 19 September 2015
Short description: | p11@RIMS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_RIMS1_5end |
Coexpression cluster: | C1926_myxofibrosarcoma_Smooth_mesodermal_Multipotent_Fibroblast_basal_papillary |
Association with transcript: | 4bp_to_uc011dyf.1_5end |
EntrezGene: | RIMS1 |
HGNC: | 17282 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the brain vasculature | 1.29e-21 | 3 |
fibroblast of choroid plexus | 7.49e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
brain vasculature | 3.66e-28 | 5 |
stroma of bone marrow | 2.63e-16 | 1 |
vasculature of organ | 3.48e-13 | 11 |
vascular plexus | 7.49e-09 | 2 |
ventricle of nervous system | 7.49e-09 | 2 |
choroid plexus | 7.49e-09 | 2 |
brain ventricle | 7.49e-09 | 2 |
ventricular system of brain | 7.49e-09 | 2 |
ventricular system of central nervous system | 7.49e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 1.41e-16 | 1 |
histiocytoma | 3.43e-09 | 2 |
malignant fibroxanthoma | 3.43e-09 | 2 |
skin carcinoma | 5.94e-09 | 2 |
skin cancer | 5.94e-09 | 2 |
integumentary system cancer | 5.94e-09 | 2 |