FFCP PHASE1:Hg19::chr21:47552113..47552127,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1292 | |EntrezGene=1292 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=2212 | |HGNC=2212 | ||
|TSSclassifier=strong | |||
|UniProt=Q6FHW5 | |UniProt=Q6FHW5 | ||
|association_with_transcript=330bp_to_CR536573_5end | |association_with_transcript=330bp_to_CR536573_5end | ||
|cluster_id=chr21:47552113..47552127,+ | |||
|coexpression_cluster_id=C198 | |||
|description=CAGE_peak_36_at_COL6A2_5end | |description=CAGE_peak_36_at_COL6A2_5end | ||
|id=chr21:47552113..47552127,+ | |id=chr21:47552113..47552127,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.02e-34!180;CL:0000057!2.85e-26!75;CL:0000048!1.48e-15!430;CL:0000723!1.14e-14!436;CL:0000034!2.82e-14!444;CL:0000680!4.32e-13!57;CL:0000056!4.32e-13!57;CL:0000355!4.32e-13!57;CL:0000187!9.01e-12!54;CL:0000183!1.46e-11!59;CL:0002620!1.27e-10!23;CL:0000499!2.33e-10!27;CL:0000393!4.86e-10!60;CL:0000211!4.86e-10!60;CL:0002320!2.21e-09!365;CL:0000192!1.21e-08!42;CL:0000514!1.21e-08!42;CL:0002371!2.06e-08!591;CL:0002334!7.20e-08!12;CL:0000327!2.39e-07!14;CL:0000134!2.79e-07!358;CL:0000144!8.21e-07!625 | |ontology_enrichment_celltype=CL:0000055!3.02e-34!180;CL:0000057!2.85e-26!75;CL:0000048!1.48e-15!430;CL:0000723!1.14e-14!436;CL:0000034!2.82e-14!444;CL:0000680!4.32e-13!57;CL:0000056!4.32e-13!57;CL:0000355!4.32e-13!57;CL:0000187!9.01e-12!54;CL:0000183!1.46e-11!59;CL:0002620!1.27e-10!23;CL:0000499!2.33e-10!27;CL:0000393!4.86e-10!60;CL:0000211!4.86e-10!60;CL:0002320!2.21e-09!365;CL:0000192!1.21e-08!42;CL:0000514!1.21e-08!42;CL:0002371!2.06e-08!591;CL:0002334!7.20e-08!12;CL:0000327!2.39e-07!14;CL:0000134!2.79e-07!358;CL:0000144!8.21e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0002570;2.62e-12;8!CL:0000135;5.05e-10;3!CL:0000388;5.05e-10;3!CL:0000499;1.53e-09;28!CL:0002559;3.85e-09;5!CL:0002334;1.50e-07;12!CL:0000153;4.50e-07;9!CL:0000447;4.50e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.73e-14,76;CL:0002570,5.02e-12,8;CL:0002320,5.62e-11,361;CL:0000048,6.63e-11,427;CL:0000723,1.51e-10,433;CL:0000034,4.36e-10,441;CL:0000135,5.12e-10,3;CL:0000388,5.12e-10,3;CL:0000499,1.41e-09,28;CL:0002559,4.10e-09,5;CL:0000134,9.00e-09,354;CL:0002334,1.00e-07,12;CL:0000153,3.24e-07,9;CL:0000447,3.24e-07,9;CL:0000219,6.11e-07,386;CL:0002583,8.13e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!3.18e-09!14 | |ontology_enrichment_disease=DOID:2394!3.18e-09!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.11e-16!83;UBERON:0002329!4.11e-16!83;UBERON:0003077!4.11e-16!83;UBERON:0003059!4.11e-16!83;UBERON:0007282!4.11e-16!83;UBERON:0009618!4.11e-16!83;UBERON:0007285!4.11e-16!83;UBERON:0004290!1.01e-15!70;UBERON:0000486!1.34e-13!82;UBERON:0002385!1.61e-13!63;UBERON:0001015!1.61e-13!63;UBERON:0000383!1.61e-13!63;UBERON:0001134!5.96e-13!61;UBERON:0002036!5.96e-13!61;UBERON:0003082!5.96e-13!61;UBERON:0005256!1.07e-10!143;UBERON:0002199!6.43e-10!45;UBERON:0002416!6.43e-10!45;UBERON:0002384!6.80e-10!375;UBERON:0003102!3.59e-09!95;UBERON:0001013!3.68e-09!14;UBERON:0002097!1.02e-07!40 | |ontology_enrichment_uberon=UBERON:0000914!4.11e-16!83;UBERON:0002329!4.11e-16!83;UBERON:0003077!4.11e-16!83;UBERON:0003059!4.11e-16!83;UBERON:0007282!4.11e-16!83;UBERON:0009618!4.11e-16!83;UBERON:0007285!4.11e-16!83;UBERON:0004290!1.01e-15!70;UBERON:0000486!1.34e-13!82;UBERON:0002385!1.61e-13!63;UBERON:0001015!1.61e-13!63;UBERON:0000383!1.61e-13!63;UBERON:0001134!5.96e-13!61;UBERON:0002036!5.96e-13!61;UBERON:0003082!5.96e-13!61;UBERON:0005256!1.07e-10!143;UBERON:0002199!6.43e-10!45;UBERON:0002416!6.43e-10!45;UBERON:0002384!6.80e-10!375;UBERON:0003102!3.59e-09!95;UBERON:0001013!3.68e-09!14;UBERON:0002097!1.02e-07!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0001013;4.81e-18;14!UBERON:0007846;5.05e-10;3!UBERON:0000043;5.05e-10;3!UBERON:0007845;5.05e-10;3!UBERON:0002072;2.16e-09;5!UBERON:0002073;3.85e-09;5!UBERON:0004905;2.54e-08;8!UBERON:0000982;2.54e-08;8!UBERON:0004770;2.54e-08;8!UBERON:0003102;7.51e-08;50!UBERON:0002199;9.36e-08;46!UBERON:0002416;9.36e-08;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,6.18e-18,14;UBERON:0002199,5.23e-11,46;UBERON:0002416,5.23e-11,46;UBERON:0002384,2.58e-10,371;UBERON:0003102,4.99e-10,99;UBERON:0007846,5.12e-10,3;UBERON:0000043,5.12e-10,3;UBERON:0007845,5.12e-10,3;UBERON:0002072,1.49e-09,5;UBERON:0002073,4.10e-09,5;UBERON:0005086,4.10e-09,5;UBERON:0004905,1.11e-08,8;UBERON:0000982,1.11e-08,8;UBERON:0004770,1.11e-08,8 | |||
|phase1_expression=0.908391896352783,0.856402095563933,0.986680828671798,0,1.78784437770915,1.74467704820074,0,2.52687949370732,2.08948502559871,0,0,0,0.263766978228454,0.74259811776028,1.65698687863958,2.6893005858071,2.41077811209591,2.19093027116212,0.975865597581014,0.492484232307152,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0.255725123687061,1.44575660953827,1.00267582127178,2.462390822334,0.795285947051099,0.486634870302636,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0.132409180813219,2.58152958673932,0.354668382198357,0.560677600142307,0,1.72667283892012,0.311211035399766,0.134710672069688,0.653847612453835,0.756787138224657,0.576175924479999,0.234321431833797,2.49728061464256,0,1.49448680551801,0.469737994575059,0.161872944368132,0.140450806702248,0.61246251376468,1.22834317311768,0.206651562351531,1.18800285728205,1.23633464639278,0,0.718618141816238,0,0,0.554128230968366,0,1.5324389789951,0.751190294532984,0,1.07633781413317,1.49490172172997,0.423863802319124,1.20036438433761,0.309157587715317,0.772921620136887,0.744467425326359,0.843881661206331,0.292311015483596,1.00973509697646,0.552299391853796,0.80823028409406,1.42003837006646,0.503760491138201,0.847802961552438,0,0,0,0,0,0.116193942869518,0.207322110030741,0,0,0,9.64861407289328,1.38134921352481,2.3218396401599,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0.325808305310325,2.07986957055916,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.205654985406647,0,0,0.448524337381443,0,0.22001485746285,0.258543431515556,7.15312891703765,3.381211010224,0.531876233169741,1.04007436911366,0.257207374262142,1.41849132023278,0.266422179016099,0.714889968290738,1.08524321078289,0,0,0.355391948742546,0.791951872933429,0,0,0.099972991182057,0,0.502257091432126,0,0.479249710983165,0,0,0.723906533337896,0.821905290201534,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.981531933753119,4.50153468953709,2.17012018959788,0.831883446123229,0.535286966391485,0.157702415033935,0.468565659970853,0.902838299183157,0,2.0694614258501,0.664225598535437,0.368738337083406,1.12948698808508,0.587403472388222,1.37257369524342,0,0,0,0,0,0,0.744323423456331,0.306923946576125,1.40330047216537,0.128139149255701,0,0.321707842287215,1.48418066444991,1.85051632563187,4.6166048581413,0.821271560138091,1.55776328755086,3.25389059687886,0,0,0,0.34444334449382,0.910455840033585,2.09799063935079,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,1.6068392984416,1.7400729292582,0.924291702687866,1.38153307253517,0.275673144969061,0.751941714077915,0.870100163485371,0.255679882248303,1.95870478422822,0,0,0,0,0,3.1481234683064,0,0,0,0,0.55597265731176,0,0.744316738719335,0.316379424718726,0,0.511795582622668,0,0,0.78494864019923,0.539617372749944,0.823611089208164,0.235624804691373,0.202182481573316,0,0.421258456238981,0.48763373908959,0.974853958525138,0,0.545999645631943,1.27264888758341,0,1.10273068709225,0,0.438450885253763,0,2.62357900818653,0.405820753925408,0.30982349809975,0.281695602532241,0.430234056612155,0.392996164052485,0,0.709522128141196,1.89996871767898,1.97576935775941,0,2.0996083214699,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.23874448473769,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0.102268682502155,0,0.933118762985422,0,0,0,0.591860433821602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.698906672968121,0.343972064943233,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0.599428828746391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0,0.717873024576814,0,0,0.446342914883745,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0,0,0.0788057072991982,0,0.105600336519406,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0.113312091520126,0,1.32506888912221,0,0,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,1.04478362020812,0.701139929541673,1.10961172300523,0.568209015825267,1.0062716070103,4.44905610798268,0.686520205190771,0.453692771289717,0.621748802331122,0.591420599958536,0.318593534327405,2.69881867298163,0.310525913752519,0.414706207840855,0.53168342911599,0.521745061811734,0.601030435988874,1.14241563650639,0.813741466409323,1.63663793282303,0.429642228169954,0.464033759878494,1.59238355479446,0,2.40376993627955,2.35724642136143,0,0,0,0,0,0.694567422971502,0,0.17908884108148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| ||
|short_description=p36@COL6A2 | |short_description=p36@COL6A2 | ||
}} | }} |
Latest revision as of 23:12, 18 September 2015
Short description: | p36@COL6A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_36_at_COL6A2_5end |
Coexpression cluster: | C198_Mesenchymal_Hair_Hepatic_Fibroblast_Smooth_tenocyte_Pericytes |
Association with transcript: | 330bp_to_CR536573_5end |
EntrezGene: | COL6A2 |
HGNC: | 2212 |
UniProt: | Q6FHW5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.73e-14 | 76 |
mesenchymal stem cell of adipose | 5.02e-12 | 8 |
connective tissue cell | 5.62e-11 | 361 |
multi fate stem cell | 6.63e-11 | 427 |
somatic stem cell | 1.51e-10 | 433 |
stem cell | 4.36e-10 | 441 |
fibrocyte | 5.12e-10 | 3 |
tendon cell | 5.12e-10 | 3 |
stromal cell | 1.41e-09 | 28 |
hair follicle cell | 4.10e-09 | 5 |
mesenchymal cell | 9.00e-09 | 354 |
preadipocyte | 1.00e-07 | 12 |
GAG secreting cell | 3.24e-07 | 9 |
carbohydrate secreting cell | 3.24e-07 | 9 |
motile cell | 6.11e-07 | 386 |
subcutaneous preadipocyte | 8.13e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 6.18e-18 | 14 |
integument | 5.23e-11 | 46 |
integumental system | 5.23e-11 | 46 |
connective tissue | 2.58e-10 | 371 |
surface structure | 4.99e-10 | 99 |
dense regular connective tissue | 5.12e-10 | 3 |
tendon | 5.12e-10 | 3 |
regular connective tissue | 5.12e-10 | 3 |
hypodermis | 1.49e-09 | 5 |
hair follicle | 4.10e-09 | 5 |
hair follicle placode | 4.10e-09 | 5 |
articulation | 1.11e-08 | 8 |
skeletal joint | 1.11e-08 | 8 |
articular system | 1.11e-08 | 8 |