FFCP PHASE1:Hg19::chr22:22900001..22900057,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23532 | |EntrezGene=23532 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9336 | |HGNC=9336 | ||
|TSSclassifier=strong | |||
|UniProt=F8WF80 | |UniProt=F8WF80 | ||
|association_with_transcript=0bp_to_ENST00000442481,uc002zwf.2,uc010gtr.2_5end | |association_with_transcript=0bp_to_ENST00000442481,uc002zwf.2,uc010gtr.2_5end | ||
|cluster_id=chr22:22900001..22900057,- | |||
|coexpression_cluster_id=C93 | |||
|description=CAGE_peak_2_at_PRAME_5end | |description=CAGE_peak_2_at_PRAME_5end | ||
|id=chr22:22900001..22900057,- | |id=chr22:22900001..22900057,- | ||
|ontology_enrichment_celltype=CL:0000039!5.31e-07!7;CL:0000586!5.31e-07!7 | |ontology_enrichment_celltype=CL:0000039!5.31e-07!7;CL:0000586!5.31e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0002573;4.20e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002573,4.27e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.24e-11;10!UBERON:0005564;1.24e-11;10 | |||
|ontology_enrichment_disease=DOID:14566!1.44e-19!239;DOID:162!5.04e-18!235;DOID:0050687!2.85e-12!143;DOID:1036!7.15e-10!8;DOID:0050686!3.53e-09!137;DOID:1115!9.11e-09!20;DOID:1909!9.22e-08!2;DOID:3095!2.43e-07!22;DOID:2994!2.43e-07!22 | |ontology_enrichment_disease=DOID:14566!1.44e-19!239;DOID:162!5.04e-18!235;DOID:0050687!2.85e-12!143;DOID:1036!7.15e-10!8;DOID:0050686!3.53e-09!137;DOID:1115!9.11e-09!20;DOID:1909!9.22e-08!2;DOID:3095!2.43e-07!22;DOID:2994!2.43e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:1909;2.34e-11;2!DOID:1115;4.56e-11;20!DOID:1036;1.68e-10;8!DOID:201;7.66e-08;6!DOID:0060100;7.66e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,1.36e-17,239;DOID:162,1.38e-15,235;DOID:1909,2.34e-11,2;DOID:0050687,2.47e-11,143;DOID:1115,4.52e-11,20;DOID:1036,1.68e-10,8;DOID:0050686,1.52e-08,137;DOID:201,7.66e-08,6;DOID:0060100,7.66e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0000473!3.29e-09!8;UBERON:0001905!7.10e-07!2;UBERON:0002757!7.10e-07!2;UBERON:0010134!7.10e-07!2;UBERON:0002784!7.10e-07!2;UBERON:0005408!7.10e-07!2;UBERON:0001899!7.10e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;5.04e-10;2!UBERON:0002757;5.04e-10;2!UBERON:0010134;5.04e-10;2!UBERON:0005408;5.04e-10;2!UBERON:0001899;5.04e-10;2!UBERON:0000473;1.84e-09;8!UBERON:0003135;6.64e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,5.80e-10,2;UBERON:0002757,5.80e-10,2;UBERON:0010134,5.80e-10,2;UBERON:0005408,5.80e-10,2;UBERON:0001899,5.80e-10,2;UBERON:0000473,1.76e-09,8;UBERON:0003135,6.43e-07,11 | |||
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| ||
|short_description=p2@PRAME | |short_description=p2@PRAME | ||
}} | }} |
Latest revision as of 07:43, 19 September 2015
Short description: | p2@PRAME |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PRAME_5end |
Coexpression cluster: | C93_chronic_acute_leukemia_acantholytic_medulloblastoma_testis_papillotubular |
Association with transcript: | 0bp_to_ENST00000442481, uc002zwf.2, uc010gtr.2_5end |
EntrezGene: | PRAME |
HGNC: | 9336 |
UniProt: | F8WF80 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Schwann cell | 4.27e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
pineal body | 5.80e-10 | 2 |
regional part of epithalamus | 5.80e-10 | 2 |
secretory circumventricular organ | 5.80e-10 | 2 |
circumventricular organ | 5.80e-10 | 2 |
epithalamus | 5.80e-10 | 2 |
testis | 1.76e-09 | 8 |
male reproductive organ | 6.43e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 1.36e-17 | 239 |
cancer | 1.38e-15 | 235 |
melanoma | 2.34e-11 | 2 |
cell type cancer | 2.47e-11 | 143 |
sarcoma | 4.52e-11 | 20 |
chronic leukemia | 1.68e-10 | 8 |
organ system cancer | 1.52e-08 | 137 |
connective tissue cancer | 7.66e-08 | 6 |
musculoskeletal system cancer | 7.66e-08 | 6 |