FFCP PHASE1:Hg19::chr13:76334452..76334459,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr13:76334452..76334459,+
|short_description=p39@LMO7
|description=CAGE_peak_39_at_LMO7_5end
|association_with_transcript=-43bp_to_ENST00000534657_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4008 | |EntrezGene=4008 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6646 | |HGNC=6646 | ||
|TSSclassifier=strong | |||
|UniProt=E9PMJ6 | |UniProt=E9PMJ6 | ||
|association_with_transcript=-43bp_to_ENST00000534657_5end | |||
|cluster_id=chr13:76334452..76334459,+ | |||
|description=CAGE_peak_39_at_LMO7_5end | |||
|id=chr13:76334452..76334459,+ | |||
|ontology_enrichment_celltype=CL:0002150!6.11e-07!3;CL:0000861!6.11e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002537;6.33e-23;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,6.83e-23,5 | |||
|ontology_enrichment_development_v019=UBERON:0008814;1.81e-07;2!UBERON:0010056;1.81e-07;2 | |||
|ontology_enrichment_disease=DOID:305!1.16e-16!106;DOID:0050687!1.56e-11!143 | |||
|ontology_enrichment_disease_v019=DOID:3111;1.18e-13;1!DOID:3603;1.18e-13;1!DOID:3910;1.81e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,1.25e-13,1;DOID:3603,1.25e-13,1;DOID:3910,1.99e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001557!6.38e-13!19;UBERON:0001737!9.08e-12!9;UBERON:0001004!3.04e-10!72;UBERON:0000065!3.65e-10!53;UBERON:0000072!5.92e-10!46;UBERON:0001007!5.99e-10!155;UBERON:0001555!5.99e-10!155;UBERON:0007026!5.99e-10!155;UBERON:0005911!1.95e-09!82;UBERON:0004119!2.23e-09!169;UBERON:0000925!2.23e-09!169;UBERON:0006595!2.23e-09!169;UBERON:0008947!3.38e-09!38;UBERON:0003258!3.38e-09!38;UBERON:0000077!8.18e-09!130;UBERON:0004921!9.01e-09!129;UBERON:0004185!9.01e-09!129;UBERON:0002619!1.04e-07!22;UBERON:0001869!1.70e-07!32;UBERON:0000064!1.74e-07!219;UBERON:0000344!1.75e-07!12;UBERON:0001950!2.55e-07!20;UBERON:0003929!3.35e-07!54;UBERON:0000062!3.66e-07!511;UBERON:0001893!7.25e-07!34;UBERON:0005153!7.26e-07!37;UBERON:0002020!9.39e-07!34;UBERON:0003528!9.39e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;1.43e-16;7!UBERON:0005631;8.73e-12;10!UBERON:0000158;8.73e-12;10!UBERON:0004903;1.81e-07;2!UBERON:0002173;1.81e-07;2!UBERON:0002186;1.81e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000305,1.51e-16,7;UBERON:0004871,1.47e-14,8;UBERON:0005631,1.45e-08,14;UBERON:0000158,1.45e-08,14;UBERON:0004903,1.99e-07,2;UBERON:0002173,1.99e-07,2;UBERON:0002186,1.99e-07,2 | |||
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| ||
|short_description=p39@LMO7 | |||
}} | }} |
Latest revision as of 00:05, 18 September 2015
Short description: | p39@LMO7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_39_at_LMO7_5end |
Coexpression cluster: | NA |
Association with transcript: | -43bp_to_ENST00000534657_5end |
EntrezGene: | LMO7 |
HGNC: | 6646 |
UniProt: | E9PMJ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 6.83e-23 | 5 |
Ontology term | p-value | n |
---|---|---|
amnion | 1.51e-16 | 7 |
somatic layer of lateral plate mesoderm | 1.47e-14 | 8 |
extraembryonic membrane | 1.45e-08 | 14 |
membranous layer | 1.45e-08 | 14 |
bronchoalveolar duct junction | 1.99e-07 | 2 |
alveolar duct | 1.99e-07 | 2 |
bronchiole | 1.99e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 1.25e-13 | 1 |
mucinous cystadenocarcinoma | 1.25e-13 | 1 |
lung adenocarcinoma | 1.99e-07 | 2 |