FFCP PHASE1:Hg19::chr22:33255318..33255329,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7078 | |EntrezGene=7078 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11822 | |HGNC=11822 | ||
|TSSclassifier=strong | |||
|UniProt=Q6LEP5 | |UniProt=Q6LEP5 | ||
|association_with_transcript=0bp_to_D45917_5end | |association_with_transcript=0bp_to_D45917_5end | ||
|cluster_id=chr22:33255318..33255329,+ | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_13_at_TIMP3_5end | |description=CAGE_peak_13_at_TIMP3_5end | ||
|id=chr22:33255318..33255329,+ | |id=chr22:33255318..33255329,+ | ||
|ontology_enrichment_celltype=CL:0002334!2.41e-08!12;CL:0000136!5.17e-08!15 | |ontology_enrichment_celltype=CL:0002334!2.41e-08!12;CL:0000136!5.17e-08!15 | ||
|ontology_enrichment_celltype_v019=CL:0002334;1.98e-12;12!CL:0000349;2.67e-09;19!CL:0000136;1.70e-08;13!CL:0002541;3.20e-08;3!CL:0000097;1.87e-07;5!CL:0002537;5.44e-07;5!CL:0002579;8.49e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,1.76e-12,12;CL:0000136,7.75e-11,15;CL:0000349,2.60e-09,19;CL:0002541,3.20e-08,3;CL:0000097,2.54e-07,5;CL:0002028,2.54e-07,5;CL:0002579,5.70e-07,3;CL:0002537,8.63e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004923!2.52e-11!57;UBERON:0005631!1.64e-08!14;UBERON:0000158!1.64e-08!14;UBERON:0003124!2.01e-07!7;UBERON:0005156!7.55e-07!59;UBERON:0000990!7.55e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;2.43e-10;24!UBERON:0005631;2.77e-10;10!UBERON:0000158;2.77e-10;10!UBERON:0003124;3.20e-08;3!UBERON:0000920;3.20e-08;3!UBERON:0002072;2.80e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,7.94e-14,14;UBERON:0000158,7.94e-14,14;UBERON:0003124,1.81e-11,7;UBERON:0000478,2.38e-10,24;UBERON:0004923,9.63e-10,66;UBERON:0000920,3.20e-08,3;UBERON:0007023,4.77e-08,114;UBERON:0002072,2.42e-07,5 | |||
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| ||
|short_description=p13@TIMP3 | |short_description=p13@TIMP3 | ||
}} | }} |
Latest revision as of 22:34, 19 September 2015
Short description: | p13@TIMP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_TIMP3_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 0bp_to_D45917_5end |
EntrezGene: | TIMP3 |
HGNC: | 11822 |
UniProt: | Q6LEP5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 1.76e-12 | 12 |
fat cell | 7.75e-11 | 15 |
extraembryonic cell | 2.60e-09 | 19 |
chorionic membrane mesenchymal stem cell | 3.20e-08 | 3 |
mast cell | 2.54e-07 | 5 |
basophil mast progenitor cell | 2.54e-07 | 5 |
omentum preadipocyte | 5.70e-07 | 3 |
amnion mesenchymal stem cell | 8.63e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 7.94e-14 | 14 |
membranous layer | 7.94e-14 | 14 |
chorion | 1.81e-11 | 7 |
extraembryonic structure | 2.38e-10 | 24 |
organ component layer | 9.63e-10 | 66 |
egg chorion | 3.20e-08 | 3 |
adult organism | 4.77e-08 | 114 |
hypodermis | 2.42e-07 | 5 |