FFCP PHASE1:Hg19::chr22:46041721..46041741,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:46041721..46041741,+ | |||
|description=CAGE_peak_at_chr22:46041721..46041741,+ | |description=CAGE_peak_at_chr22:46041721..46041741,+ | ||
|id=chr22:46041721..46041741,+ | |id=chr22:46041721..46041741,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002127;2.66e-18;1!CL:0000911;2.66e-18;1!CL:0000814;2.66e-18;1!CL:0002178;8.62e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,2.66e-18,1;CL:0000914,2.66e-18,1;CL:0000911,2.66e-18,1;CL:0000814,2.66e-18,1;CL:0002042,2.66e-18,1;CL:0002039,2.66e-18,1;CL:0002040,2.66e-18,1;CL:0002041,2.66e-18,1;CL:0000893,7.98e-10,2;CL:0002489,7.98e-10,2;CL:0000809,7.98e-10,2;CL:0000808,7.98e-10,2;CL:0000894,7.98e-10,2;CL:0000806,7.98e-10,2;CL:0000807,7.98e-10,2;CL:0000805,7.98e-10,2;CL:0002425,7.98e-10,2;CL:0002178,7.70e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002425;7.97e-10;2!UBERON:0007297;1.44e-09;2 | |||
|ontology_enrichment_disease=DOID:162!1.17e-22!235;DOID:14566!9.20e-22!239;DOID:305!1.60e-19!106;DOID:0050687!2.31e-16!143;DOID:2531!2.20e-08!51;DOID:0060083!2.20e-08!51;DOID:0050686!1.32e-07!137;DOID:299!3.77e-07!25 | |ontology_enrichment_disease=DOID:162!1.17e-22!235;DOID:14566!9.20e-22!239;DOID:305!1.60e-19!106;DOID:0050687!2.31e-16!143;DOID:2531!2.20e-08!51;DOID:0060083!2.20e-08!51;DOID:0050686!1.32e-07!137;DOID:299!3.77e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:299;7.30e-11;25!DOID:4074;1.44e-09;2!DOID:4905;1.44e-09;2!DOID:4468;1.44e-09;2!DOID:4929;1.44e-09;2!DOID:3498;1.44e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:299,6.25e-11,25;DOID:4929,1.03e-09,2;DOID:4074,1.57e-09,2;DOID:4905,1.57e-09,2;DOID:3498,1.57e-09,2;DOID:4468,1.86e-09,2;DOID:305,2.06e-09,106;DOID:162,1.32e-07,235;DOID:14566,1.99e-07,239;DOID:0050686,4.13e-07,137;DOID:0050687,8.30e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0006947!7.89e-07!3;UBERON:0004054!7.89e-07!3 | |ontology_enrichment_uberon=UBERON:0006947!7.89e-07!3;UBERON:0004054!7.89e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001301;8.72e-18;1!UBERON:0004913;8.72e-18;1!UBERON:0003703;8.72e-18;1!UBERON:0001174;8.72e-18;1!UBERON:0004914;8.72e-18;1!UBERON:0000058;1.57e-07;10!UBERON:0002114;8.62e-07;2!UBERON:0006947;8.62e-07;3!UBERON:0004054;8.62e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,4.44e-18,1;UBERON:0003703,4.44e-18,1;UBERON:0001174,4.44e-18,1;UBERON:0004914,4.44e-18,1;UBERON:0001301,1.70e-17,1;UBERON:0000974,1.05e-07,10;UBERON:0002114,6.88e-07,2 | |||
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| ||
|short_description=p@chr22:46041721..46041741,+ | |short_description=p@chr22:46041721..46041741,+ | ||
}} | }} |
Latest revision as of 22:05, 28 July 2015
Short description: | p@chr22:46041721..46041741, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:46041721..46041741, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 2.66e-18 | 1 |
immature NK T cell | 2.66e-18 | 1 |
effector T cell | 2.66e-18 | 1 |
mature NK T cell | 2.66e-18 | 1 |
immature NK T cell stage IV | 2.66e-18 | 1 |
immature NK T cell stage I | 2.66e-18 | 1 |
immature NK T cell stage II | 2.66e-18 | 1 |
immature NK T cell stage III | 2.66e-18 | 1 |
thymocyte | 7.98e-10 | 2 |
double negative thymocyte | 7.98e-10 | 2 |
double-positive, alpha-beta thymocyte | 7.98e-10 | 2 |
DN4 thymocyte | 7.98e-10 | 2 |
DN1 thymic pro-T cell | 7.98e-10 | 2 |
DN2 thymocyte | 7.98e-10 | 2 |
DN3 thymocyte | 7.98e-10 | 2 |
immature single positive thymocyte | 7.98e-10 | 2 |
early T lineage precursor | 7.98e-10 | 2 |
epithelial cell of stomach | 7.70e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 4.44e-18 | 1 |
extrahepatic bile duct | 4.44e-18 | 1 |
common bile duct | 4.44e-18 | 1 |
duodenal papilla | 4.44e-18 | 1 |
epididymis | 1.70e-17 | 1 |
neck | 1.05e-07 | 10 |
duodenum | 6.88e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 6.25e-11 | 25 |
tubular adenocarcinoma | 1.03e-09 | 2 |
pancreas adenocarcinoma | 1.57e-09 | 2 |
pancreatic carcinoma | 1.57e-09 | 2 |
pancreatic ductal adenocarcinoma | 1.57e-09 | 2 |
clear cell adenocarcinoma | 1.86e-09 | 2 |
carcinoma | 2.06e-09 | 106 |
cancer | 1.32e-07 | 235 |
disease of cellular proliferation | 1.99e-07 | 239 |
organ system cancer | 4.13e-07 | 137 |
cell type cancer | 8.30e-07 | 143 |