FFCP PHASE1:Hg19::chr14:106321882..106321895,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr14:106321882..106321895,-
|short_description=p6@FJ197674
|description=CAGE_peak_6_at_FJ197674_5end
|association_with_transcript=-144bp_to_FJ197674_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-144bp_to_FJ197674_5end | |||
|cluster_id=chr14:106321882..106321895,- | |||
|coexpression_cluster_id=C350 | |||
|description=CAGE_peak_6_at_FJ197674_5end | |||
|id=chr14:106321882..106321895,- | |||
|ontology_enrichment_celltype=CL:0000945!1.82e-57!24;CL:0000826!1.82e-57!24;CL:0000236!2.69e-35!14;CL:0000542!9.88e-30!53;CL:0000051!9.88e-30!53;CL:0000838!1.09e-27!52;CL:0002087!1.47e-14!119;CL:0000738!2.96e-12!140;CL:0000037!7.49e-12!172;CL:0000566!7.49e-12!172;CL:0000988!9.87e-11!182;CL:0002031!1.50e-09!124;CL:0002032!3.17e-09!165;CL:0000837!3.17e-09!165;CL:0000842!1.17e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.16e-93;24!CL:0000236;8.05e-65;13!CL:0000542;6.66e-31;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.57e-93,24;CL:0000826,1.57e-93,24;CL:0000236,3.19e-60,14;CL:0000542,1.63e-45,53;CL:0000051,1.63e-45,53;CL:0000838,2.18e-41,52;CL:0002087,7.56e-19,115;CL:0002031,7.87e-16,120;CL:0000738,2.12e-15,136;CL:0002032,1.85e-12,161;CL:0000837,1.85e-12,161;CL:0000037,8.58e-12,168;CL:0000988,5.19e-11,177 | |||
|ontology_enrichment_development_v019=CL:0000051;6.66e-31;53!UBERON:0004872;8.99e-10;7!UBERON:0001045;2.74e-08;1!UBERON:0008801;2.74e-08;1 | |||
|ontology_enrichment_disease=DOID:0060058!3.36e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:12603;6.75e-09;1!DOID:0060058;6.21e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,6.50e-09,1;DOID:0060058,6.09e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.64e-11!115;UBERON:0002106!8.45e-10!3;UBERON:0004854!8.45e-10!3;UBERON:0009034!8.45e-10!3;UBERON:0002095!8.45e-10!3;UBERON:0004782!8.45e-10!3;UBERON:0003281!8.45e-10!3;UBERON:0009664!8.45e-10!3;UBERON:0002296!8.45e-10!3;UBERON:0005602!8.45e-10!3;UBERON:0001179!8.45e-10!3;UBERON:0006293!8.45e-10!3;UBERON:0001829!7.47e-07!2;UBERON:0004177!7.67e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.19e-10;3!UBERON:0000029;5.59e-09;1!UBERON:0001154;2.74e-08;1!UBERON:0001831;2.74e-08;1!UBERON:0001153;2.74e-08;1!UBERON:0009854;2.74e-08;1!UBERON:0001567;2.74e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.55e-10,3;UBERON:0004854,1.55e-10,3;UBERON:0009034,1.55e-10,3;UBERON:0002095,1.55e-10,3;UBERON:0004782,1.55e-10,3;UBERON:0003281,1.55e-10,3;UBERON:0009664,1.55e-10,3;UBERON:0002296,1.55e-10,3;UBERON:0005602,1.55e-10,3;UBERON:0001179,1.55e-10,3;UBERON:0006293,1.55e-10,3;UBERON:0000029,5.59e-09,1;UBERON:0001154,2.46e-08,1;UBERON:0001153,2.46e-08,1;UBERON:0001045,2.46e-08,1;UBERON:0001831,3.79e-08,1;UBERON:0001567,3.79e-08,1;UBERON:0008801,3.79e-08,1 | |||
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| ||
|short_description=p6@FJ197674 | |||
}} | }} |
Latest revision as of 18:40, 24 July 2015
Short description: | p6@FJ197674 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_FJ197674_5end |
Coexpression cluster: | C350_b_lymph_acute_CD19_lymphoma_spleen_B |
Association with transcript: | -144bp_to_FJ197674_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.57e-93 | 24 |
pro-B cell | 1.57e-93 | 24 |
B cell | 3.19e-60 | 14 |
lymphocyte | 1.63e-45 | 53 |
common lymphoid progenitor | 1.63e-45 | 53 |
lymphoid lineage restricted progenitor cell | 2.18e-41 | 52 |
nongranular leukocyte | 7.56e-19 | 115 |
hematopoietic lineage restricted progenitor cell | 7.87e-16 | 120 |
leukocyte | 2.12e-15 | 136 |
hematopoietic oligopotent progenitor cell | 1.85e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.85e-12 | 161 |
hematopoietic stem cell | 8.58e-12 | 168 |
hematopoietic cell | 5.19e-11 | 177 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.55e-10 | 3 |
gastrointestinal system mesentery | 1.55e-10 | 3 |
stomach region | 1.55e-10 | 3 |
mesentery | 1.55e-10 | 3 |
gastrointestinal system serosa | 1.55e-10 | 3 |
mesentery of stomach | 1.55e-10 | 3 |
gut mesentery | 1.55e-10 | 3 |
dorsal mesentery | 1.55e-10 | 3 |
dorsal mesogastrium | 1.55e-10 | 3 |
peritoneal cavity | 1.55e-10 | 3 |
spleen primordium | 1.55e-10 | 3 |
lymph node | 5.59e-09 | 1 |
vermiform appendix | 2.46e-08 | 1 |
caecum | 2.46e-08 | 1 |
midgut | 2.46e-08 | 1 |
parotid gland | 3.79e-08 | 1 |
cheek | 3.79e-08 | 1 |
parotid gland primordium | 3.79e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 6.50e-09 | 1 |
lymphoma | 6.09e-07 | 10 |