FFCP PHASE1:Hg19::chr2:148778973..148779035,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55777 | |EntrezGene=55777 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20444 | |HGNC=20444 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000470063,ENST00000473478_5end | |association_with_transcript=0bp_to_ENST00000470063,ENST00000473478_5end | ||
|cluster_id=chr2:148778973..148779035,+ | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_3_at_MBD5_5end | |description=CAGE_peak_3_at_MBD5_5end | ||
|id=chr2:148778973..148779035,+ | |id=chr2:148778973..148779035,+ | ||
|ontology_enrichment_celltype=CL:0000738!7.63e-23!140;CL:0000542!1.45e-21!53;CL:0000051!1.45e-21!53;CL:0000838!2.08e-21!52;CL:0002031!3.76e-17!124;CL:0002087!5.21e-17!119;CL:0000037!6.30e-17!172;CL:0000566!6.30e-17!172;CL:0000988!1.94e-15!182;CL:0002032!1.59e-14!165;CL:0000837!1.59e-14!165;CL:0000791!9.52e-12!18;CL:0000789!9.52e-12!18;CL:0002420!9.52e-12!18;CL:0002419!9.52e-12!18;CL:0000790!9.52e-12!18;CL:0000084!2.83e-11!25;CL:0000827!2.83e-11!25;CL:0000945!1.16e-09!24;CL:0000826!1.16e-09!24;CL:0000625!4.49e-08!11;CL:0000236!6.28e-07!14 | |ontology_enrichment_celltype=CL:0000738!7.63e-23!140;CL:0000542!1.45e-21!53;CL:0000051!1.45e-21!53;CL:0000838!2.08e-21!52;CL:0002031!3.76e-17!124;CL:0002087!5.21e-17!119;CL:0000037!6.30e-17!172;CL:0000566!6.30e-17!172;CL:0000988!1.94e-15!182;CL:0002032!1.59e-14!165;CL:0000837!1.59e-14!165;CL:0000791!9.52e-12!18;CL:0000789!9.52e-12!18;CL:0002420!9.52e-12!18;CL:0002419!9.52e-12!18;CL:0000790!9.52e-12!18;CL:0000084!2.83e-11!25;CL:0000827!2.83e-11!25;CL:0000945!1.16e-09!24;CL:0000826!1.16e-09!24;CL:0000625!4.49e-08!11;CL:0000236!6.28e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000542;7.43e-14;53!CL:0000791;1.68e-12;18!CL:0000789;1.68e-12;18!CL:0002419;1.68e-12;18!CL:0000084;3.72e-12;25!CL:0000945;3.39e-10;24!CL:0000625;1.54e-08;11!CL:0002087;8.99e-08;104!CL:0000236;6.68e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,6.00e-26,136;CL:0000542,5.29e-23,53;CL:0000051,5.29e-23,53;CL:0000838,7.78e-23,52;CL:0002031,1.05e-19,120;CL:0002087,1.26e-19,115;CL:0000037,3.33e-19,168;CL:0000988,1.11e-17,177;CL:0002032,1.48e-16,161;CL:0000837,1.48e-16,161;CL:0000791,2.22e-12,18;CL:0000789,2.22e-12,18;CL:0002420,2.22e-12,18;CL:0002419,2.22e-12,18;CL:0000790,2.22e-12,18;CL:0000084,4.54e-12,25;CL:0000827,4.54e-12,25;CL:0000945,3.64e-10,24;CL:0000826,3.64e-10,24;CL:0000625,1.76e-08,11;CL:0000236,2.90e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000051;7.43e-14;53!CL:0000790;1.68e-12;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.67e-16!115;UBERON:0002193!1.14e-07!112;UBERON:0001017!8.50e-07!82;UBERON:0002390!8.56e-07!102;UBERON:0003061!8.56e-07!102 | |ontology_enrichment_uberon=UBERON:0007023!2.67e-16!115;UBERON:0002193!1.14e-07!112;UBERON:0001017!8.50e-07!82;UBERON:0002390!8.56e-07!102;UBERON:0003061!8.56e-07!102 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.90e-07;15!UBERON:0000179;8.90e-07;15!UBERON:0000463;8.90e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.29e-17,114;UBERON:0002193,7.04e-09,108;UBERON:0002390,6.32e-08,98;UBERON:0003061,6.32e-08,98 | |||
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| ||
|short_description=p3@MBD5 | |short_description=p3@MBD5 | ||
}} | }} |
Latest revision as of 09:50, 17 September 2015
Short description: | p3@MBD5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MBD5_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 0bp_to_ENST00000470063, ENST00000473478_5end |
EntrezGene: | MBD5 |
HGNC: | 20444 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 6.00e-26 | 136 |
lymphocyte | 5.29e-23 | 53 |
common lymphoid progenitor | 5.29e-23 | 53 |
lymphoid lineage restricted progenitor cell | 7.78e-23 | 52 |
hematopoietic lineage restricted progenitor cell | 1.05e-19 | 120 |
nongranular leukocyte | 1.26e-19 | 115 |
hematopoietic stem cell | 3.33e-19 | 168 |
hematopoietic cell | 1.11e-17 | 177 |
hematopoietic oligopotent progenitor cell | 1.48e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.48e-16 | 161 |
mature alpha-beta T cell | 2.22e-12 | 18 |
alpha-beta T cell | 2.22e-12 | 18 |
immature T cell | 2.22e-12 | 18 |
mature T cell | 2.22e-12 | 18 |
immature alpha-beta T cell | 2.22e-12 | 18 |
T cell | 4.54e-12 | 25 |
pro-T cell | 4.54e-12 | 25 |
lymphocyte of B lineage | 3.64e-10 | 24 |
pro-B cell | 3.64e-10 | 24 |
CD8-positive, alpha-beta T cell | 1.76e-08 | 11 |
B cell | 2.90e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.29e-17 | 114 |
hemolymphoid system | 7.04e-09 | 108 |
hematopoietic system | 6.32e-08 | 98 |
blood island | 6.32e-08 | 98 |