FFCP PHASE1:Hg19::chr8:42360015..42360030,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6575 | |EntrezGene=6575 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10947 | |HGNC=10947 | ||
|TSSclassifier=strong | |||
|UniProt=E5RIX1 | |UniProt=E5RIX1 | ||
|association_with_transcript=115bp_to_ENST00000522707_5end | |association_with_transcript=115bp_to_ENST00000522707_5end | ||
|cluster_id=chr8:42360015..42360030,- | |||
|coexpression_cluster_id=C267 | |||
|description=CAGE_peak_20_at_SLC20A2_5end | |description=CAGE_peak_20_at_SLC20A2_5end | ||
|id=chr8:42360015..42360030,- | |id=chr8:42360015..42360030,- | ||
|ontology_enrichment_celltype=CL:0002541!6.82e-19!3;CL:1000415!5.29e-13!2;CL:0000039!3.64e-08!7;CL:0000586!3.64e-08!7 | |ontology_enrichment_celltype=CL:0002541!6.82e-19!3;CL:1000415!5.29e-13!2;CL:0000039!3.64e-08!7;CL:0000586!3.64e-08!7 | ||
|ontology_enrichment_celltype_v019=CL:0002541;1.22e-44;3!CL:0000039;8.22e-20;7!CL:0000586;8.22e-20;7!CL:0000083;1.12e-09;4!CL:0000349;5.94e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.22e-44,3;CL:0000039,8.62e-20,7;CL:0000586,8.62e-20,7;CL:0000083,1.12e-09,4;CL:0000349,5.94e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;8.34e-34;1 | |||
|ontology_enrichment_disease=DOID:1749!6.20e-10!14;DOID:305!9.55e-08!106;DOID:1799!1.46e-07!1;DOID:10165!1.46e-07!1;DOID:1798!1.46e-07!1;DOID:0050619!3.40e-07!1;DOID:1357!3.40e-07!1;DOID:178!4.85e-07!1;DOID:326!4.85e-07!1;DOID:3978!4.85e-07!1;DOID:3394!4.85e-07!1;DOID:5844!4.85e-07!1;DOID:0050687!5.36e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:1799;1.84e-34;1!DOID:10165;1.84e-34;1!DOID:1798;1.84e-34;1!DOID:1793;1.12e-09;4!DOID:3095;5.49e-07;22!DOID:2994;5.49e-07;22!DOID:170;7.17e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,1.84e-34,1;DOID:10165,1.84e-34,1;DOID:1798,1.84e-34,1;DOID:1793,1.12e-09,4;DOID:3095,5.57e-07,22;DOID:2994,5.57e-07,22;DOID:170,7.17e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000476!6.82e-19!3;UBERON:0000920!6.82e-19!3;UBERON:0003124!3.89e-14!7;UBERON:0005631!1.15e-10!14;UBERON:0000158!1.15e-10!14;UBERON:0001872!1.58e-10!5;UBERON:0002110!5.92e-09!3;UBERON:0006242!5.92e-09!3;UBERON:0002294!4.02e-08!7;UBERON:0001173!4.02e-08!7;UBERON:0004912!4.02e-08!7;UBERON:0001764!3.40e-07!1;UBERON:0001825!3.40e-07!1;UBERON:0000997!8.18e-07!1;UBERON:0005056!8.18e-07!1;UBERON:0002581!9.73e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.22e-44;3!UBERON:0000920;1.22e-44;3!UBERON:0005631;3.25e-14;10!UBERON:0000158;3.25e-14;10!UBERON:0000478;4.19e-13;24!UBERON:0001987;1.63e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.22e-44,3;UBERON:0003124,9.27e-43,7;UBERON:0005631,7.17e-22,14;UBERON:0000158,7.17e-22,14;UBERON:0000478,4.11e-13,24;UBERON:0001987,1.57e-09,4;UBERON:0004340,1.57e-09,4 | |||
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|short_description=p20@SLC20A2 | |short_description=p20@SLC20A2 | ||
}} | }} |
Latest revision as of 08:03, 18 September 2015
Short description: | p20@SLC20A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_SLC20A2_5end |
Coexpression cluster: | C267_pancreatic_placenta_choriocarcinoma_testicular_teratocarcinoma_chorionic_clear |
Association with transcript: | 115bp_to_ENST00000522707_5end |
EntrezGene: | SLC20A2 |
HGNC: | 10947 |
UniProt: | E5RIX1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.22e-44 | 3 |
germ line cell | 8.62e-20 | 7 |
germ cell | 8.62e-20 | 7 |
epithelial cell of pancreas | 1.12e-09 | 4 |
extraembryonic cell | 5.94e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.22e-44 | 3 |
chorion | 9.27e-43 | 7 |
extraembryonic membrane | 7.17e-22 | 14 |
membranous layer | 7.17e-22 | 14 |
extraembryonic structure | 4.11e-13 | 24 |
placenta | 1.57e-09 | 4 |
allantois | 1.57e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 1.84e-34 | 1 |
endocrine pancreas cancer | 1.84e-34 | 1 |
pancreatic endocrine carcinoma | 1.84e-34 | 1 |
pancreatic cancer | 1.12e-09 | 4 |
germ cell and embryonal cancer | 5.57e-07 | 22 |
germ cell cancer | 5.57e-07 | 22 |
endocrine gland cancer | 7.17e-07 | 6 |