FFCP PHASE1:Hg19::chr14:24606368..24606372,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:24606368..24606372,+
|short_description=p3@PSME1
|description=CAGE_peak_3_at_PSME1_5end
|association_with_transcript=-234bp_to_ENST00000559741_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5720 | |EntrezGene=5720 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9568 | |HGNC=9568 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-234bp_to_ENST00000559741_5end | |||
|cluster_id=chr14:24606368..24606372,+ | |||
|description=CAGE_peak_3_at_PSME1_5end | |||
|id=chr14:24606368..24606372,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.49e-20!42;CL:0000860!7.24e-20!45;CL:0002087!2.50e-15!119;CL:0002031!1.28e-14!124;CL:0000738!1.88e-14!140;CL:0002009!6.83e-11!65;CL:0002194!9.05e-11!63;CL:0000576!9.05e-11!63;CL:0000040!9.05e-11!63;CL:0000559!9.05e-11!63;CL:0000037!1.00e-10!172;CL:0000566!1.00e-10!172;CL:0002032!2.12e-10!165;CL:0000837!2.12e-10!165;CL:0000988!5.32e-10!182;CL:0000839!9.46e-10!70;CL:0000557!1.57e-09!71;CL:0000766!1.02e-08!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.13e-27;33!CL:0002057;4.13e-27;33!CL:0000473;1.00e-17;39!CL:0000234;1.00e-17;39!CL:0000576;1.14e-15;48!CL:0000766;4.13e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.95e-32,42;CL:0002057,6.95e-32,42;CL:0000473,8.29e-26,48;CL:0000234,8.29e-26,48;CL:0002009,1.15e-17,61;CL:0002194,1.67e-17,59;CL:0000576,1.67e-17,59;CL:0000040,1.67e-17,59;CL:0000559,1.67e-17,59;CL:0002087,6.20e-17,115;CL:0002031,2.41e-15,120;CL:0000738,2.87e-15,136;CL:0000557,8.84e-15,67;CL:0000839,3.78e-14,66;CL:0000766,1.34e-13,72;CL:0000037,1.40e-11,168;CL:0002032,8.48e-11,161;CL:0000837,8.48e-11,161;CL:0000988,2.71e-10,177;CL:0000763,1.50e-08,108;CL:0000049,1.50e-08,108 | |||
|ontology_enrichment_development_v019=CL:0002057;1.49e-22;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.69e-08!80;UBERON:0002193!2.12e-07!112;UBERON:0002390!2.30e-07!102;UBERON:0003061!2.30e-07!102;UBERON:0001474!6.67e-07!86;UBERON:0004765!9.04e-07!101;UBERON:0001434!9.04e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.94e-14,76;UBERON:0002390,2.86e-12,98;UBERON:0003061,2.86e-12,98;UBERON:0001474,3.88e-12,82;UBERON:0002405,9.51e-12,93;UBERON:0002193,9.91e-12,108;UBERON:0001434,7.82e-10,100;UBERON:0004765,8.04e-10,90;UBERON:0002204,2.33e-08,167 | |||
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| ||
|short_description=p3@PSME1 | |||
}} | }} |
Latest revision as of 13:23, 19 September 2015
Short description: | p3@PSME1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PSME1_5end |
Coexpression cluster: | NA |
Association with transcript: | -234bp_to_ENST00000559741_5end |
EntrezGene: | PSME1 |
HGNC: | 9568 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.95e-32 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.95e-32 | 42 |
defensive cell | 8.29e-26 | 48 |
phagocyte | 8.29e-26 | 48 |
macrophage dendritic cell progenitor | 1.15e-17 | 61 |
monopoietic cell | 1.67e-17 | 59 |
monocyte | 1.67e-17 | 59 |
monoblast | 1.67e-17 | 59 |
promonocyte | 1.67e-17 | 59 |
nongranular leukocyte | 6.20e-17 | 115 |
hematopoietic lineage restricted progenitor cell | 2.41e-15 | 120 |
leukocyte | 2.87e-15 | 136 |
granulocyte monocyte progenitor cell | 8.84e-15 | 67 |
myeloid lineage restricted progenitor cell | 3.78e-14 | 66 |
myeloid leukocyte | 1.34e-13 | 72 |
hematopoietic stem cell | 1.40e-11 | 168 |
hematopoietic oligopotent progenitor cell | 8.48e-11 | 161 |
hematopoietic multipotent progenitor cell | 8.48e-11 | 161 |
hematopoietic cell | 2.71e-10 | 177 |
myeloid cell | 1.50e-08 | 108 |
common myeloid progenitor | 1.50e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.94e-14 | 76 |
hematopoietic system | 2.86e-12 | 98 |
blood island | 2.86e-12 | 98 |
bone element | 3.88e-12 | 82 |
immune system | 9.51e-12 | 93 |
hemolymphoid system | 9.91e-12 | 108 |
skeletal system | 7.82e-10 | 100 |
skeletal element | 8.04e-10 | 90 |
musculoskeletal system | 2.33e-08 | 167 |