FFCP PHASE1:Hg19::chr2:216272850..216272854,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:216272850..216272854,- | |||
|coexpression_cluster_id=C79 | |||
|description=CAGE_peak_at_chr2:216272850..216272854,- | |description=CAGE_peak_at_chr2:216272850..216272854,- | ||
|id=chr2:216272850..216272854,- | |id=chr2:216272850..216272854,- | ||
|ontology_enrichment_celltype=CL:0000055!5.40e-23!180;CL:0000057!9.25e-23!75;CL:0002620!4.65e-12!23;CL:0000048!5.09e-12!430;CL:0002371!9.40e-12!591;CL:0000723!2.13e-11!436;CL:0000144!4.04e-11!625;CL:0000034!1.33e-10!444;CL:0000183!4.43e-10!59;CL:0000680!1.15e-09!57;CL:0000056!1.15e-09!57;CL:0000355!1.15e-09!57;CL:0000187!5.68e-09!54;CL:0000548!4.04e-08!679;CL:0000004!4.04e-08!679;CL:0000255!4.04e-08!679;CL:0000012!6.83e-08!682;CL:0002494!9.92e-08!16;CL:0002334!1.42e-07!12;CL:0000393!2.54e-07!60;CL:0000211!2.54e-07!60 | |ontology_enrichment_celltype=CL:0000055!5.40e-23!180;CL:0000057!9.25e-23!75;CL:0002620!4.65e-12!23;CL:0000048!5.09e-12!430;CL:0002371!9.40e-12!591;CL:0000723!2.13e-11!436;CL:0000144!4.04e-11!625;CL:0000034!1.33e-10!444;CL:0000183!4.43e-10!59;CL:0000680!1.15e-09!57;CL:0000056!1.15e-09!57;CL:0000355!1.15e-09!57;CL:0000187!5.68e-09!54;CL:0000548!4.04e-08!679;CL:0000004!4.04e-08!679;CL:0000255!4.04e-08!679;CL:0000012!6.83e-08!682;CL:0002494!9.92e-08!16;CL:0002334!1.42e-07!12;CL:0000393!2.54e-07!60;CL:0000211!2.54e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0002541;4.15e-11;3!CL:0002620;7.10e-11;23!CL:0002581;2.20e-08;1!CL:0002591;2.20e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,4.16e-11,3;CL:0002620,6.62e-11,23;CL:0002581,1.84e-08,1;CL:0002591,4.07e-08,1;CL:0000057,7.86e-08,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2513;2.20e-08;1!DOID:3571;2.20e-08;1!DOID:17;7.93e-07;5!DOID:450;7.93e-07;5!DOID:66;7.93e-07;5!DOID:423;7.93e-07;5!DOID:0080000;7.93e-07;5!DOID:11722;7.93e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,1.98e-08,1;DOID:2513,3.06e-08,1;DOID:17,8.17e-07,5;DOID:450,8.17e-07,5;DOID:66,8.17e-07,5;DOID:423,8.17e-07,5;DOID:0080000,8.17e-07,5;DOID:11722,8.17e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!1.40e-09!95;UBERON:0000914!2.16e-09!83;UBERON:0002329!2.16e-09!83;UBERON:0003077!2.16e-09!83;UBERON:0003059!2.16e-09!83;UBERON:0007282!2.16e-09!83;UBERON:0009618!2.16e-09!83;UBERON:0007285!2.16e-09!83;UBERON:0002199!2.76e-09!45;UBERON:0002416!2.76e-09!45;UBERON:0002385!1.10e-08!63;UBERON:0001015!1.10e-08!63;UBERON:0000383!1.10e-08!63;UBERON:0001134!1.73e-08!61;UBERON:0002036!1.73e-08!61;UBERON:0003082!1.73e-08!61;UBERON:0004290!1.93e-08!70;UBERON:0004872!2.58e-08!84;UBERON:0005256!3.17e-08!143;UBERON:0001013!1.27e-07!14;UBERON:0003914!2.66e-07!118;UBERON:0002097!2.79e-07!40;UBERON:0000486!4.18e-07!82;UBERON:0004535!4.39e-07!110;UBERON:0000948!4.56e-07!24;UBERON:0005498!4.56e-07!24;UBERON:0004140!4.56e-07!24;UBERON:0009881!4.56e-07!24;UBERON:0004141!4.56e-07!24;UBERON:0003084!4.56e-07!24;UBERON:0007005!4.56e-07!24;UBERON:0004139!4.56e-07!24;UBERON:0004291!4.56e-07!24;UBERON:0000490!8.25e-07!138 | |ontology_enrichment_uberon=UBERON:0003102!1.40e-09!95;UBERON:0000914!2.16e-09!83;UBERON:0002329!2.16e-09!83;UBERON:0003077!2.16e-09!83;UBERON:0003059!2.16e-09!83;UBERON:0007282!2.16e-09!83;UBERON:0009618!2.16e-09!83;UBERON:0007285!2.16e-09!83;UBERON:0002199!2.76e-09!45;UBERON:0002416!2.76e-09!45;UBERON:0002385!1.10e-08!63;UBERON:0001015!1.10e-08!63;UBERON:0000383!1.10e-08!63;UBERON:0001134!1.73e-08!61;UBERON:0002036!1.73e-08!61;UBERON:0003082!1.73e-08!61;UBERON:0004290!1.93e-08!70;UBERON:0004872!2.58e-08!84;UBERON:0005256!3.17e-08!143;UBERON:0001013!1.27e-07!14;UBERON:0003914!2.66e-07!118;UBERON:0002097!2.79e-07!40;UBERON:0000486!4.18e-07!82;UBERON:0004535!4.39e-07!110;UBERON:0000948!4.56e-07!24;UBERON:0005498!4.56e-07!24;UBERON:0004140!4.56e-07!24;UBERON:0009881!4.56e-07!24;UBERON:0004141!4.56e-07!24;UBERON:0003084!4.56e-07!24;UBERON:0007005!4.56e-07!24;UBERON:0004139!4.56e-07!24;UBERON:0004291!4.56e-07!24;UBERON:0000490!8.25e-07!138 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;4.15e-11;3!UBERON:0000920;4.15e-11;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,4.16e-11,3;UBERON:0002097,8.06e-08,41;UBERON:0002199,7.02e-07,46;UBERON:0002416,7.02e-07,46 | |||
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|short_description=p@chr2:216272850..216272854,- | |short_description=p@chr2:216272850..216272854,- | ||
}} | }} |
Latest revision as of 06:11, 29 July 2015
Short description: | p@chr2:216272850..216272854, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:216272850..216272854, - |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 4.16e-11 | 3 |
skin fibroblast | 6.62e-11 | 23 |
perirenal preadipocyte | 1.84e-08 | 1 |
smooth muscle cell of the pulmonary artery | 4.07e-08 | 1 |
fibroblast | 7.86e-08 | 76 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 4.16e-11 | 3 |
skin of body | 8.06e-08 | 41 |
integument | 7.02e-07 | 46 |
integumental system | 7.02e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 1.98e-08 | 1 |
basal cell carcinoma | 3.06e-08 | 1 |
musculoskeletal system disease | 8.17e-07 | 5 |
myotonic disease | 8.17e-07 | 5 |
muscle tissue disease | 8.17e-07 | 5 |
myopathy | 8.17e-07 | 5 |
muscular disease | 8.17e-07 | 5 |
myotonic dystrophy | 8.17e-07 | 5 |