FFCP PHASE1:Hg19::chr9:35618364..35618415,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=971 | |EntrezGene=971 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1696 | |HGNC=1696 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T4Q7,Q5T4Q8,Q0H7P2 | |UniProt=Q5T4Q7,Q5T4Q8,Q0H7P2 | ||
|association_with_transcript=0bp_to_ENST00000378430,ENST00000378431,ENST00000482121,ENST00000490239,uc003zxc.1,uc010mkt.1_5end | |association_with_transcript=0bp_to_ENST00000378430,ENST00000378431,ENST00000482121,ENST00000490239,uc003zxc.1,uc010mkt.1_5end | ||
|cluster_id=chr9:35618364..35618415,- | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_1_at_CD72_5end | |description=CAGE_peak_1_at_CD72_5end | ||
|id=chr9:35618364..35618415,- | |id=chr9:35618364..35618415,- | ||
|ontology_enrichment_celltype=CL:0002087!1.14e-24!119;CL:0000738!1.31e-24!140;CL:0000037!5.08e-22!172;CL:0000566!5.08e-22!172;CL:0002031!6.32e-22!124;CL:0000945!5.16e-20!24;CL:0000826!5.16e-20!24;CL:0002032!1.90e-19!165;CL:0000837!1.90e-19!165;CL:0000988!2.01e-19!182;CL:0000236!3.41e-18!14;CL:0000557!2.28e-12!71;CL:0000542!4.08e-12!53;CL:0000051!4.08e-12!53;CL:0002009!6.68e-12!65;CL:0000838!2.51e-11!52;CL:0002194!1.05e-10!63;CL:0000576!1.05e-10!63;CL:0000040!1.05e-10!63;CL:0000559!1.05e-10!63;CL:0000839!6.12e-10!70;CL:0000766!7.32e-10!76;CL:0002057!3.74e-09!42;CL:0000763!1.06e-08!112;CL:0000049!1.06e-08!112;CL:0000860!4.38e-08!45 | |ontology_enrichment_celltype=CL:0002087!1.14e-24!119;CL:0000738!1.31e-24!140;CL:0000037!5.08e-22!172;CL:0000566!5.08e-22!172;CL:0002031!6.32e-22!124;CL:0000945!5.16e-20!24;CL:0000826!5.16e-20!24;CL:0002032!1.90e-19!165;CL:0000837!1.90e-19!165;CL:0000988!2.01e-19!182;CL:0000236!3.41e-18!14;CL:0000557!2.28e-12!71;CL:0000542!4.08e-12!53;CL:0000051!4.08e-12!53;CL:0002009!6.68e-12!65;CL:0000838!2.51e-11!52;CL:0002194!1.05e-10!63;CL:0000576!1.05e-10!63;CL:0000040!1.05e-10!63;CL:0000559!1.05e-10!63;CL:0000839!6.12e-10!70;CL:0000766!7.32e-10!76;CL:0002057!3.74e-09!42;CL:0000763!1.06e-08!112;CL:0000049!1.06e-08!112;CL:0000860!4.38e-08!45 | ||
|ontology_enrichment_celltype_v019=CL:0000945;2.89e-29;24!CL:0000236;1.43e-26;13!CL:0000542;1.04e-09;53!CL:0000226;1.25e-07;3!CL:0000842;1.25e-07;3!CL:0002619;3.50e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.86e-29,24;CL:0000826,2.86e-29,24;CL:0000236,1.25e-28,14;CL:0002087,2.07e-13,115;CL:0000542,3.49e-13,53;CL:0000051,3.49e-13,53;CL:0000738,2.08e-12,136;CL:0000838,5.27e-12,52;CL:0000037,2.89e-11,168;CL:0002031,2.34e-10,120;CL:0000988,3.57e-10,177;CL:0002032,9.98e-10,161;CL:0000837,9.98e-10,161;CL:0000226,1.13e-07,3;CL:0000842,1.13e-07,3;CL:0002619,3.15e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;1.04e-09;53!UBERON:0004872;3.63e-08;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.85e-35!115;UBERON:0002390!1.15e-18!102;UBERON:0003061!1.15e-18!102;UBERON:0002193!1.69e-17!112;UBERON:0002371!1.69e-10!80;UBERON:0002405!2.70e-10!115;UBERON:0000178!2.51e-09!15;UBERON:0000179!2.51e-09!15;UBERON:0000463!2.51e-09!15;UBERON:0001474!5.21e-09!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.05e-17;15!UBERON:0000179;3.05e-17;15!UBERON:0000463;3.05e-17;15!UBERON:0002390;5.67e-13;32!UBERON:0002193;3.61e-09;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.81e-17,15;UBERON:0000179,2.81e-17,15;UBERON:0000463,2.81e-17,15;UBERON:0007023,4.28e-16,114;UBERON:0002193,3.59e-10,108;UBERON:0002390,7.08e-10,98;UBERON:0003061,7.08e-10,98 | |||
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| ||
|short_description=p1@CD72 | |short_description=p1@CD72 | ||
}} | }} |
Latest revision as of 07:49, 17 September 2015
Short description: | p1@CD72 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CD72_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 0bp_to_ENST00000378430, ENST00000378431, ENST00000482121, ENST00000490239, uc003zxc.1, uc010mkt.1_5end |
EntrezGene: | CD72 |
HGNC: | 1696 |
UniProt: | Q5T4Q7Q5T4Q8Q0H7P2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.86e-29 | 24 |
pro-B cell | 2.86e-29 | 24 |
B cell | 1.25e-28 | 14 |
nongranular leukocyte | 2.07e-13 | 115 |
lymphocyte | 3.49e-13 | 53 |
common lymphoid progenitor | 3.49e-13 | 53 |
leukocyte | 2.08e-12 | 136 |
lymphoid lineage restricted progenitor cell | 5.27e-12 | 52 |
hematopoietic stem cell | 2.89e-11 | 168 |
hematopoietic lineage restricted progenitor cell | 2.34e-10 | 120 |
hematopoietic cell | 3.57e-10 | 177 |
hematopoietic oligopotent progenitor cell | 9.98e-10 | 161 |
hematopoietic multipotent progenitor cell | 9.98e-10 | 161 |
single nucleate cell | 1.13e-07 | 3 |
mononuclear cell | 1.13e-07 | 3 |
adult endothelial progenitor cell | 3.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 2.81e-17 | 15 |
haemolymphatic fluid | 2.81e-17 | 15 |
organism substance | 2.81e-17 | 15 |
adult organism | 4.28e-16 | 114 |
hemolymphoid system | 3.59e-10 | 108 |
hematopoietic system | 7.08e-10 | 98 |
blood island | 7.08e-10 | 98 |