FFCP PHASE1:Hg19::chr9:74204452..74204456,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-60bp_to_ENST00000437667_5end | |association_with_transcript=-60bp_to_ENST00000437667_5end | ||
|cluster_id=chr9:74204452..74204456,+ | |||
|coexpression_cluster_id=C1598 | |||
|description=CAGE_peak_1_at_ENST00000437667_5end | |description=CAGE_peak_1_at_ENST00000437667_5end | ||
|id=chr9:74204452..74204456,+ | |id=chr9:74204452..74204456,+ | ||
|ontology_enrichment_celltype=CL:0002031!9.88e-20!124;CL:0002057!9.90e-18!42;CL:0000738!1.54e-17!140;CL:0000860!3.58e-17!45;CL:0002032!5.54e-16!165;CL:0000837!5.54e-16!165;CL:0000037!6.57e-16!172;CL:0000566!6.57e-16!172;CL:0002087!1.43e-15!119;CL:0000988!2.45e-14!182;CL:0000839!2.38e-13!70;CL:0000557!1.18e-12!71;CL:0002009!1.76e-12!65;CL:0002194!1.18e-11!63;CL:0000576!1.18e-11!63;CL:0000040!1.18e-11!63;CL:0000559!1.18e-11!63;CL:0000766!3.97e-11!76;CL:0000763!2.01e-10!112;CL:0000049!2.01e-10!112;CL:0002320!8.15e-07!365 | |ontology_enrichment_celltype=CL:0002031!9.88e-20!124;CL:0002057!9.90e-18!42;CL:0000738!1.54e-17!140;CL:0000860!3.58e-17!45;CL:0002032!5.54e-16!165;CL:0000837!5.54e-16!165;CL:0000037!6.57e-16!172;CL:0000566!6.57e-16!172;CL:0002087!1.43e-15!119;CL:0000988!2.45e-14!182;CL:0000839!2.38e-13!70;CL:0000557!1.18e-12!71;CL:0002009!1.76e-12!65;CL:0002194!1.18e-11!63;CL:0000576!1.18e-11!63;CL:0000040!1.18e-11!63;CL:0000559!1.18e-11!63;CL:0000766!3.97e-11!76;CL:0000763!2.01e-10!112;CL:0000049!2.01e-10!112;CL:0002320!8.15e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.61e-15;33!CL:0002057;8.61e-15;33!CL:0000473;1.02e-10;39!CL:0000234;1.02e-10;39!CL:0000576;1.61e-09;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,1.14e-19,120;CL:0000860,9.05e-18,42;CL:0002057,9.05e-18,42;CL:0000738,1.70e-17,136;CL:0000473,8.15e-16,48;CL:0000234,8.15e-16,48;CL:0002032,8.18e-16,161;CL:0000837,8.18e-16,161;CL:0000037,1.03e-15,168;CL:0002087,1.78e-15,115;CL:0000988,3.86e-14,177;CL:0000839,2.22e-13,66;CL:0000557,1.16e-12,67;CL:0002009,1.56e-12,61;CL:0002194,1.08e-11,59;CL:0000576,1.08e-11,59;CL:0000040,1.08e-11,59;CL:0000559,1.08e-11,59;CL:0000766,3.55e-11,72;CL:0000763,2.78e-10,108;CL:0000049,2.78e-10,108;CL:0002320,8.52e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;2.97e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.42e-12!80;UBERON:0001474!8.00e-11!86;UBERON:0004765!5.83e-10!101;UBERON:0001434!5.83e-10!101;UBERON:0002390!1.18e-07!102;UBERON:0003061!1.18e-07!102;UBERON:0002384!8.92e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.39e-12,76;UBERON:0004765,1.61e-11,90;UBERON:0001474,9.44e-11,82;UBERON:0001434,4.25e-10,100;UBERON:0002405,2.04e-09,93;UBERON:0002390,1.57e-07,98;UBERON:0003061,1.57e-07,98;UBERON:0002384,8.92e-07,371 | |||
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| ||
|short_description=p1@ENST00000437667 | |short_description=p1@ENST00000437667 | ||
}} | }} |
Latest revision as of 02:34, 1 August 2015
Short description: | p1@ENST00000437667 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000437667_5end |
Coexpression cluster: | C1598_CD34_CD133_CD4_CD8_Smooth_Cardiac_acute |
Association with transcript: | -60bp_to_ENST00000437667_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 1.14e-19 | 120 |
classical monocyte | 9.05e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.05e-18 | 42 |
leukocyte | 1.70e-17 | 136 |
defensive cell | 8.15e-16 | 48 |
phagocyte | 8.15e-16 | 48 |
hematopoietic oligopotent progenitor cell | 8.18e-16 | 161 |
hematopoietic multipotent progenitor cell | 8.18e-16 | 161 |
hematopoietic stem cell | 1.03e-15 | 168 |
nongranular leukocyte | 1.78e-15 | 115 |
hematopoietic cell | 3.86e-14 | 177 |
myeloid lineage restricted progenitor cell | 2.22e-13 | 66 |
granulocyte monocyte progenitor cell | 1.16e-12 | 67 |
macrophage dendritic cell progenitor | 1.56e-12 | 61 |
monopoietic cell | 1.08e-11 | 59 |
monocyte | 1.08e-11 | 59 |
monoblast | 1.08e-11 | 59 |
promonocyte | 1.08e-11 | 59 |
myeloid leukocyte | 3.55e-11 | 72 |
myeloid cell | 2.78e-10 | 108 |
common myeloid progenitor | 2.78e-10 | 108 |
connective tissue cell | 8.52e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.39e-12 | 76 |
skeletal element | 1.61e-11 | 90 |
bone element | 9.44e-11 | 82 |
skeletal system | 4.25e-10 | 100 |
immune system | 2.04e-09 | 93 |
hematopoietic system | 1.57e-07 | 98 |
blood island | 1.57e-07 | 98 |
connective tissue | 8.92e-07 | 371 |