FFCP PHASE1:Hg19::chr14:65785502..65785529,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr14:65785502..65785529,-
|short_description=p1@ENST00000553754
|description=CAGE_peak_1_at_ENST00000553754_5end
|association_with_transcript=0bp_to_ENST000005...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000553754_5end | |||
|cluster_id=chr14:65785502..65785529,- | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_1_at_ENST00000553754_5end | |||
|id=chr14:65785502..65785529,- | |||
|ontology_enrichment_celltype=CL:0000945!7.59e-58!24;CL:0000826!7.59e-58!24;CL:0000236!2.95e-34!14;CL:0000542!2.12e-25!53;CL:0000051!2.12e-25!53;CL:0000838!1.54e-23!52;CL:0002087!5.62e-11!119;CL:0000738!1.94e-08!140;CL:0002031!1.61e-07!124;CL:0000037!3.80e-07!172;CL:0000566!3.80e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000945;3.67e-88;24!CL:0000236;1.29e-62;13!CL:0000542;1.34e-23;53!CL:0000946;3.70e-08;1!CL:0000786;3.70e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.59e-88,24;CL:0000826,3.59e-88,24;CL:0000236,5.53e-69,14;CL:0000838,8.29e-39,52;CL:0000542,5.22e-38,53;CL:0000051,5.22e-38,53;CL:0002087,2.07e-15,115;CL:0002031,1.26e-14,120;CL:0000738,1.70e-12,136;CL:0002032,5.17e-10,161;CL:0000837,5.17e-10,161;CL:0000037,1.89e-09,168;CL:0000988,8.60e-09,177;CL:0000946,3.83e-08,1;CL:0000786,3.83e-08,1;CL:0000980,3.83e-08,1 | |||
|ontology_enrichment_development_v019=CL:0000051;1.34e-23;53!UBERON:0001045;4.55e-08;1!UBERON:0006298;9.29e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;3.70e-08;1!DOID:0050177;3.70e-08;1!DOID:0050427;3.70e-08;1!DOID:2355;9.29e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,3.58e-08,1;DOID:0050177,3.58e-08,1;DOID:0050427,3.58e-08,1;DOID:2355,1.21e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.87e-17!115;UBERON:0000178!5.21e-16!15;UBERON:0000179!5.21e-16!15;UBERON:0000463!5.21e-16!15;UBERON:0004177!3.74e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.05e-15;15!UBERON:0000179;4.05e-15;15!UBERON:0000463;4.05e-15;15!UBERON:0002390;2.72e-08;32!UBERON:0002372;3.22e-08;1!UBERON:0001961;3.22e-08;1!UBERON:0001744;3.22e-08;1!UBERON:0001042;3.22e-08;1!UBERON:0001735;3.22e-08;1!UBERON:0001154;4.55e-08;1!UBERON:0001153;4.55e-08;1!UBERON:0009854;4.55e-08;1!UBERON:0001736;9.29e-08;1!UBERON:0002193;7.39e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.38e-15,15;UBERON:0000179,4.38e-15,15;UBERON:0000463,4.38e-15,15;UBERON:0002372,3.11e-08,1;UBERON:0001961,3.11e-08,1;UBERON:0001744,3.11e-08,1;UBERON:0001735,3.11e-08,1;UBERON:0001154,5.05e-08,1;UBERON:0001153,5.05e-08,1;UBERON:0001045,5.05e-08,1;UBERON:0001736,9.29e-08,1;UBERON:0006298,9.29e-08,1 | |||
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| ||
|short_description=p1@ENST00000553754 | |||
}} | }} |
Latest revision as of 22:00, 24 July 2015
Short description: | p1@ENST00000553754 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000553754_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 0bp_to_ENST00000553754_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.59e-88 | 24 |
pro-B cell | 3.59e-88 | 24 |
B cell | 5.53e-69 | 14 |
lymphoid lineage restricted progenitor cell | 8.29e-39 | 52 |
lymphocyte | 5.22e-38 | 53 |
common lymphoid progenitor | 5.22e-38 | 53 |
nongranular leukocyte | 2.07e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 1.26e-14 | 120 |
leukocyte | 1.70e-12 | 136 |
hematopoietic oligopotent progenitor cell | 5.17e-10 | 161 |
hematopoietic multipotent progenitor cell | 5.17e-10 | 161 |
hematopoietic stem cell | 1.89e-09 | 168 |
hematopoietic cell | 8.60e-09 | 177 |
antibody secreting cell | 3.83e-08 | 1 |
plasma cell | 3.83e-08 | 1 |
plasmablast | 3.83e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
blood | 4.38e-15 | 15 |
haemolymphatic fluid | 4.38e-15 | 15 |
organism substance | 4.38e-15 | 15 |
tonsil | 3.11e-08 | 1 |
mucosa-associated lymphoid tissue | 3.11e-08 | 1 |
lymphoid tissue | 3.11e-08 | 1 |
tonsillar ring | 3.11e-08 | 1 |
vermiform appendix | 5.05e-08 | 1 |
caecum | 5.05e-08 | 1 |
midgut | 5.05e-08 | 1 |
submandibular gland | 9.29e-08 | 1 |
submandibular gland primordium | 9.29e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 3.58e-08 | 1 |
monogenic disease | 3.58e-08 | 1 |
xeroderma pigmentosum | 3.58e-08 | 1 |
anemia | 1.21e-07 | 1 |