FFCP PHASE1:Hg19::chr2:72375269..72375282,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56603 | |EntrezGene=56603 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20581 | |HGNC=20581 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NR63 | |UniProt=Q9NR63 | ||
|association_with_transcript=-102bp_to_ENST00000001146_5end | |association_with_transcript=-102bp_to_ENST00000001146_5end | ||
|cluster_id=chr2:72375269..72375282,- | |||
|coexpression_cluster_id=C2704 | |||
|description=CAGE_peak_7_at_CYP26B1_5end | |description=CAGE_peak_7_at_CYP26B1_5end | ||
|id=chr2:72375269..72375282,- | |id=chr2:72375269..72375282,- | ||
|ontology_enrichment_celltype=CL:0002541!6.57e-08!3;CL:0000135!7.72e-08!3;CL:0000386!7.72e-08!3;CL:0000388!7.72e-08!3;CL:0002582!2.67e-07!3;CL:0000214!3.04e-07!3;CL:0000327!3.68e-07!14 | |ontology_enrichment_celltype=CL:0002541!6.57e-08!3;CL:0000135!7.72e-08!3;CL:0000386!7.72e-08!3;CL:0000388!7.72e-08!3;CL:0002582!2.67e-07!3;CL:0000214!3.04e-07!3;CL:0000327!3.68e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0002537;6.01e-21;5!CL:0000746;1.14e-09;3!CL:0000708;1.60e-09;3!CL:0000737;1.44e-07;4!CL:0002563;1.86e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,6.01e-21,5;CL:0000746,1.10e-09,3;CL:0000513,1.10e-09,3;CL:0000708,1.81e-09,3;CL:0000737,1.40e-07,4;CL:0002563,1.80e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000513;1.14e-09;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:171;6.60e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,6.28e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.61e-12!14;UBERON:0000158!1.61e-12!14;UBERON:0004923!1.90e-08!57;UBERON:0003124!3.52e-08!7;UBERON:0000476!6.57e-08!3;UBERON:0000920!6.57e-08!3;UBERON:0000043!7.72e-08!3;UBERON:0006915!3.04e-07!3;UBERON:0002018!3.04e-07!3;UBERON:0002217!3.04e-07!3;UBERON:0007616!3.04e-07!3 | |ontology_enrichment_uberon=UBERON:0005631!1.61e-12!14;UBERON:0000158!1.61e-12!14;UBERON:0004923!1.90e-08!57;UBERON:0003124!3.52e-08!7;UBERON:0000476!6.57e-08!3;UBERON:0000920!6.57e-08!3;UBERON:0000043!7.72e-08!3;UBERON:0006915!3.04e-07!3;UBERON:0002018!3.04e-07!3;UBERON:0002217!3.04e-07!3;UBERON:0007616!3.04e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0007029;8.64e-26;1!UBERON:0002346;1.11e-25;4!UBERON:0000923;1.11e-25;4!UBERON:0010316;1.11e-25;4!UBERON:0005291;1.11e-25;4!UBERON:0002050;8.98e-21;5!UBERON:0005423;8.98e-21;5!UBERON:0000305;2.85e-15;7!UBERON:0005631;5.41e-11;10!UBERON:0000158;5.41e-11;10!UBERON:0003210;1.60e-09;3!UBERON:0000014;1.86e-07;4!UBERON:0001242;1.86e-07;4!UBERON:0001262;1.86e-07;4!UBERON:0004786;1.86e-07;4!UBERON:0004808;1.86e-07;4!UBERON:0001277;1.86e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,9.79e-26,1;UBERON:0000305,2.85e-15,7;UBERON:0004871,1.71e-13,8;UBERON:0003210,1.81e-09,3;UBERON:0005631,4.04e-08,14;UBERON:0000158,4.04e-08,14;UBERON:0001242,1.80e-07,4;UBERON:0001262,1.80e-07,4;UBERON:0004786,1.80e-07,4;UBERON:0004808,1.80e-07,4;UBERON:0001277,1.80e-07,4;UBERON:0000014,1.92e-07,4 | |||
|phase1_expression=0,0.642301571672949,0,0,0,0.872338524100369,0,0,0,0,0,0,0.527533956456907,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69490601792545,0.255725123687061,0.722878304769133,0,0,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,0.454072282934794,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.112131084345361,1.30788020649984,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0.713715955188647,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0.0821271560138091,0.519254429183621,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,3.58116727106535,0.593929361665277,6.45037474408387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.307801034015188,0,0,0,0,0.31900115973192,0.549585560411174,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0.273810757783986,0,0,0,0,0,0.717873024576814,0,0.429226048136571,0,0,0,0,0,0,0,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0.327872630709804,0,0,0.122026264901963,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,1.91317428091515,4.58562327758308,0,0,0,0,0,1.531227386766,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,1.45713297917742,0,0.198950775161368,0.118920090777569,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0.157771562193185,0,0.436350690340377,0,0.371995018166751,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0.151557396436479,0.803892390468535,0,0.103432995861895,0,0,0.322944549180031,0.0620747142958579,0,0.12729431655633,0.202117188958219,0.217716747896961,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0.603821380773079,0 | |phase1_expression=0,0.642301571672949,0,0,0,0.872338524100369,0,0,0,0,0,0,0.527533956456907,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69490601792545,0.255725123687061,0.722878304769133,0,0,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,0.454072282934794,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.112131084345361,1.30788020649984,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0.713715955188647,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0.0821271560138091,0.519254429183621,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,3.58116727106535,0.593929361665277,6.45037474408387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.307801034015188,0,0,0,0,0.31900115973192,0.549585560411174,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0.273810757783986,0,0,0,0,0,0.717873024576814,0,0.429226048136571,0,0,0,0,0,0,0,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0.327872630709804,0,0,0.122026264901963,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,1.91317428091515,4.58562327758308,0,0,0,0,0,1.531227386766,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,1.45713297917742,0,0.198950775161368,0.118920090777569,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0.157771562193185,0,0.436350690340377,0,0.371995018166751,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0.151557396436479,0.803892390468535,0,0.103432995861895,0,0,0.322944549180031,0.0620747142958579,0,0.12729431655633,0.202117188958219,0.217716747896961,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0.603821380773079,0 | ||
|short_description=p7@CYP26B1 | |short_description=p7@CYP26B1 | ||
}} | }} |
Latest revision as of 08:26, 18 September 2015
Short description: | p7@CYP26B1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CYP26B1_5end |
Coexpression cluster: | C2704_amniotic_neuroectodermal_Cardiac_leiomyoblastoma_skin_neuroepithelioma_breast |
Association with transcript: | -102bp_to_ENST00000001146_5end |
EntrezGene: | CYP26B1 |
HGNC: | 20581 |
UniProt: | Q9NR63 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 6.01e-21 | 5 |
cardiac muscle cell | 1.10e-09 | 3 |
cardiac muscle myoblast | 1.10e-09 | 3 |
leptomeningeal cell | 1.81e-09 | 3 |
striated muscle cell | 1.40e-07 | 4 |
intestinal epithelial cell | 1.80e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
surface | 9.79e-26 | 1 |
amnion | 2.85e-15 | 7 |
somatic layer of lateral plate mesoderm | 1.71e-13 | 8 |
blood-cerebrospinal fluid barrier | 1.81e-09 | 3 |
extraembryonic membrane | 4.04e-08 | 14 |
membranous layer | 4.04e-08 | 14 |
intestinal mucosa | 1.80e-07 | 4 |
wall of intestine | 1.80e-07 | 4 |
gastrointestinal system mucosa | 1.80e-07 | 4 |
gastrointestinal system epithelium | 1.80e-07 | 4 |
intestinal epithelium | 1.80e-07 | 4 |
zone of skin | 1.92e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 6.28e-11 | 10 |