FFCP PHASE1:Hg19::chr3:145940214..145940228,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57088 | |EntrezGene=57088 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16497 | |HGNC=16497 | ||
|TSSclassifier=strong | |||
|UniProt=C9J664 | |UniProt=C9J664 | ||
|association_with_transcript=0bp_to_ENST00000481701_5end | |association_with_transcript=0bp_to_ENST00000481701_5end | ||
|cluster_id=chr3:145940214..145940228,- | |||
|coexpression_cluster_id=C4290 | |||
|description=CAGE_peak_14_at_PLSCR4_5end | |description=CAGE_peak_14_at_PLSCR4_5end | ||
|id=chr3:145940214..145940228,- | |id=chr3:145940214..145940228,- | ||
|ontology_enrichment_celltype=CL:0005020!1.12e-17!6;CL:0002138!1.12e-17!6;CL:0005022!1.12e-17!6;CL:0000181!1.17e-13!12;CL:0000417!1.17e-13!12;CL:0000668!1.17e-13!12;CL:0000414!1.17e-13!12;CL:0000412!1.17e-13!12;CL:0000182!1.17e-13!12;CL:0002139!2.23e-12!24;CL:0000115!2.43e-09!35;CL:0002078!3.81e-08!44 | |ontology_enrichment_celltype=CL:0005020!1.12e-17!6;CL:0002138!1.12e-17!6;CL:0005022!1.12e-17!6;CL:0000181!1.17e-13!12;CL:0000417!1.17e-13!12;CL:0000668!1.17e-13!12;CL:0000414!1.17e-13!12;CL:0000412!1.17e-13!12;CL:0000182!1.17e-13!12;CL:0002139!2.23e-12!24;CL:0000115!2.43e-09!35;CL:0002078!3.81e-08!44 | ||
|ontology_enrichment_celltype_v019=CL:0002138;2.98e-11;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,3.22e-11,6;CL:0002138,3.22e-11,6;CL:0005022,3.22e-11,6 | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.08e-16;1!CL:0005022;2.98e-11;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000996;2.08e-16;1!UBERON:0002107;2.26e-13;19!UBERON:0006925;2.26e-13;19!UBERON:0002423;3.12e-10;25!UBERON:0001473;1.15e-08;8!UBERON:0004536;1.15e-08;8!UBERON:0006558;1.15e-08;8!UBERON:0002365;3.13e-08;31!UBERON:0002330;3.13e-08;31!UBERON:0002465;4.19e-07;10!UBERON:0002368;5.44e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000996,1.41e-16,1;UBERON:0002107,2.16e-13,19;UBERON:0006925,2.16e-13,19;UBERON:0008836,2.16e-13,19;UBERON:0008835,1.31e-11,22;UBERON:0003894,1.31e-11,22;UBERON:0009854,4.08e-11,23;UBERON:0007499,3.01e-10,25;UBERON:0009497,3.01e-10,25;UBERON:0000015,3.01e-10,25;UBERON:0002423,3.01e-10,25;UBERON:0006235,3.01e-10,25;UBERON:0004161,3.01e-10,25;UBERON:0009856,7.28e-10,26;UBERON:0002417,5.55e-09,60;UBERON:0000916,5.55e-09,60;UBERON:0001473,1.22e-08,8;UBERON:0004536,1.22e-08,8;UBERON:0006558,1.22e-08,8;UBERON:0002365,2.60e-08,31;UBERON:0002330,2.60e-08,31;UBERON:0002368,2.19e-07,35;UBERON:0005172,3.72e-07,54;UBERON:0005173,3.72e-07,54;UBERON:0002465,4.39e-07,10 | |||
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| ||
|short_description=p14@PLSCR4 | |short_description=p14@PLSCR4 | ||
}} | }} |
Latest revision as of 06:42, 25 September 2015
Short description: | p14@PLSCR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_PLSCR4_5end |
Coexpression cluster: | C4290_Lymphatic_Hepatocyte_liver_adipose_breast_Renal_vagina |
Association with transcript: | 0bp_to_ENST00000481701_5end |
EntrezGene: | PLSCR4 |
HGNC: | 16497 |
UniProt: | C9J664 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 3.22e-11 | 6 |
endothelial cell of lymphatic vessel | 3.22e-11 | 6 |
vascular lymphangioblast | 3.22e-11 | 6 |
Ontology term | p-value | n |
---|---|---|
vagina | 1.41e-16 | 1 |
liver | 2.16e-13 | 19 |
digestive gland | 2.16e-13 | 19 |
liver bud | 2.16e-13 | 19 |
hepatic diverticulum | 1.31e-11 | 22 |
liver primordium | 1.31e-11 | 22 |
digestive tract diverticulum | 4.08e-11 | 23 |
epithelial sac | 3.01e-10 | 25 |
epithelium of foregut-midgut junction | 3.01e-10 | 25 |
anatomical boundary | 3.01e-10 | 25 |
hepatobiliary system | 3.01e-10 | 25 |
foregut-midgut junction | 3.01e-10 | 25 |
septum transversum | 3.01e-10 | 25 |
sac | 7.28e-10 | 26 |
abdominal segment of trunk | 5.55e-09 | 60 |
abdomen | 5.55e-09 | 60 |
lymphatic vessel | 1.22e-08 | 8 |
lymph vasculature | 1.22e-08 | 8 |
lymphatic part of lymphoid system | 1.22e-08 | 8 |
exocrine gland | 2.60e-08 | 31 |
exocrine system | 2.60e-08 | 31 |
endocrine gland | 2.19e-07 | 35 |
abdomen element | 3.72e-07 | 54 |
abdominal segment element | 3.72e-07 | 54 |
lymphoid system | 4.39e-07 | 10 |