FFCP PHASE1:Hg19::chr15:39874814..39874827,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr15:39874814..39874827,+
|short_description=p@chr15:39874814..39874827,+
|description=CAGE_peak_at_chr15:39874814..39874827,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:39874814..39874827,+ | |||
|coexpression_cluster_id=C142 | |||
|description=CAGE_peak_at_chr15:39874814..39874827,+ | |||
|id=chr15:39874814..39874827,+ | |||
|ontology_enrichment_celltype=CL:0000057!6.80e-19!75;CL:0000055!3.15e-17!180;CL:0002371!1.57e-16!591;CL:0000144!5.68e-15!625;CL:0000548!5.74e-14!679;CL:0000004!5.74e-14!679;CL:0000255!5.74e-14!679;CL:0000012!1.69e-13!682;CL:0002139!4.51e-13!24;CL:0000222!8.79e-13!119;CL:0000071!1.46e-09!18;CL:0002546!1.46e-09!18;CL:0000115!1.53e-09!35;CL:0000220!3.04e-09!246;CL:0002321!6.49e-09!248;CL:0002078!7.62e-09!44;CL:0002620!9.33e-09!23;CL:0000063!1.41e-08!578;CL:0000003!1.78e-08!722;CL:0000213!5.32e-08!57;CL:0000215!5.32e-08!57;CL:0000723!1.64e-07!436;CL:0000048!3.99e-07!430;CL:0002334!4.46e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.39e-12;24!CL:0002620;1.79e-11;23!CL:0002334;6.46e-09;12!CL:0000115;2.53e-08;36!CL:0000071;6.72e-08;18!CL:0000057;6.84e-08;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.13e-20,76;CL:0002139,3.05e-12,24;CL:0002620,1.75e-11,23;CL:0000115,1.30e-09,36;CL:0002334,3.73e-09,12;CL:0000071,5.01e-08,18;CL:0002546,5.01e-08,18;CL:0002078,1.65e-07,45;CL:0000048,2.74e-07,427;CL:0000723,3.35e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002546;6.72e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;2.45e-07;5!DOID:450;2.45e-07;5!DOID:66;2.45e-07;5!DOID:423;2.45e-07;5!DOID:0080000;2.45e-07;5!DOID:11722;2.45e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.51e-07,5;DOID:450,2.51e-07,5;DOID:66,2.51e-07,5;DOID:423,2.51e-07,5;DOID:0080000,2.51e-07,5;DOID:11722,2.51e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0002049!2.13e-14!79;UBERON:0007798!2.13e-14!79;UBERON:0004872!1.93e-13!84;UBERON:0000055!4.11e-13!69;UBERON:0001009!7.94e-13!113;UBERON:0004535!8.06e-13!110;UBERON:0001981!1.04e-10!60;UBERON:0007500!1.04e-10!60;UBERON:0004537!1.04e-10!60;UBERON:0006965!1.04e-10!60;UBERON:0002097!7.98e-10!40;UBERON:0003914!1.39e-09!118;UBERON:0001986!1.46e-09!18;UBERON:0004638!1.46e-09!18;UBERON:0004852!1.46e-09!18;UBERON:0000468!1.87e-09!659;UBERON:0002199!2.99e-09!45;UBERON:0002416!2.99e-09!45;UBERON:0000467!4.44e-09!625;UBERON:0000480!5.96e-09!626;UBERON:0001637!7.32e-09!42;UBERON:0003509!7.32e-09!42;UBERON:0004572!7.32e-09!42;UBERON:0000487!8.66e-09!22;UBERON:0006914!1.88e-08!25;UBERON:0003102!2.62e-08!95;UBERON:0003081!3.63e-07!216;UBERON:0000486!6.47e-07!82;UBERON:0000490!7.07e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.46e-09;6!UBERON:0002358;1.46e-09;6!UBERON:0003684;1.46e-09;6!UBERON:0001178;1.46e-09;6!UBERON:0002097;1.83e-08;41!UBERON:0000055;2.56e-08;65!UBERON:0004638;6.72e-08;18!UBERON:0001986;6.72e-08;18!UBERON:0004852;6.72e-08;18!UBERON:0002199;2.65e-07;46!UBERON:0002416;2.65e-07;46!UBERON:0000487;3.18e-07;22!UBERON:0001637;4.07e-07;42!UBERON:0003509;4.07e-07;42!UBERON:0004572;4.07e-07;42!UBERON:0007500;4.96e-07;56!UBERON:0001981;4.96e-07;56!UBERON:0004537;4.96e-07;56!UBERON:0000947;7.26e-07;21!UBERON:0010191;7.26e-07;21!UBERON:0004573;8.91e-07;33!UBERON:0004571;8.91e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,2.76e-13,68;UBERON:0002199,5.65e-11,46;UBERON:0002416,5.65e-11,46;UBERON:0002097,8.09e-11,41;UBERON:0002049,2.34e-10,78;UBERON:0007798,2.34e-10,78;UBERON:0004872,2.52e-10,83;UBERON:0007500,5.48e-10,59;UBERON:0001981,5.48e-10,59;UBERON:0004537,5.48e-10,59;UBERON:0006965,5.48e-10,59;UBERON:0003688,1.24e-09,6;UBERON:0002358,1.24e-09,6;UBERON:0003684,1.24e-09,6;UBERON:0001178,1.24e-09,6;UBERON:0001637,6.67e-09,42;UBERON:0003509,6.67e-09,42;UBERON:0004572,6.67e-09,42;UBERON:0004638,5.01e-08,18;UBERON:0001986,5.01e-08,18;UBERON:0004852,5.01e-08,18;UBERON:0004535,1.33e-07,109;UBERON:0000487,2.57e-07,22;UBERON:0001009,3.77e-07,112;UBERON:0000947,4.66e-07,21;UBERON:0010191,4.66e-07,21;UBERON:0004573,6.99e-07,33;UBERON:0004571,6.99e-07,33;UBERON:0003102,7.61e-07,99 | |||
|phase1_expression=4.36028110249336,10.0627246228762,3.52386010239928,16.0117277365009,7.59833860526389,13.0850778615055,0,0,0,0.491467873003018,0.697801167972428,0.873765488520689,1.58260186937072,0,0,5.3786011716142,1.20538905604795,3.65155045193687,1.95173119516203,0.123121058076788,0.612002073732759,0.940364164434263,0,0.684372125364421,0.502170558379211,0,0,0,0,0,0.464448369948228,0,1.8072355126695,0.369754010166788,0,0,0,0.553995408531877,2.20598892217156,0,0,0,0,0.145398238779565,0,0,2.55671940596253,0,0,1.7261543539329,0,0,1.72372840368309,0.645484683583826,0,2.07066573496865,0.818718450173537,0.224723484445085,3.67300670845083,0,0,1.9791078011203,0,0,6.96502172708602,0,0.622822248995575,2.51248665256743,1.0429658368404,0,2.42159801053347,0,0.316462387440884,0,0,0,0.336985893439485,0.450530678524519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,0.361439152384566,2.00535164254356,0.434539556882471,0.795285947051099,3.40644409211845,0.0945348171640679,0.443458794925128,0,0.196468613246569,0,0,0,0,0,0,0,0,0.39752481473341,1.72046919021225,0.347140501607594,2.82653970962005,0.838998872419812,0.825354125820202,3.34391946458897,0.516833518338658,1.42306505074684,3.68192674041137,1.61131726843659,2.28081631715554,2.4406205754817,3.30896772311282,8.91156142669936,1.60739510911344,0.22452937262617,0.563057402416611,1.53316637465883,1.89853131913626,2.19842092716489,0,0,0,14.4121865991642,3.54565432660823,2.91300197789081,2.29469296599051,0,1.12135520028461,3.20246987189115,2.71334303258876,1.24484414159907,0.404132016209064,1.14423332179421,0.454072282934794,0.576175924479999,0,0.312160076830321,0,0.149448680551801,0,0.323745888736263,0.140450806702248,0.204154171254893,0.491337269247072,0.723280468230358,5.94001428641027,7.91254173691382,1.82032272387605,0,0,0.375355559615893,0.554128230968366,1.75591048352335,7.66219489497549,3.15499923703853,0.226864366320042,7.5343646989322,4.05759038755278,3.81477422087211,2.10063767259082,1.54578793857658,4.89517026086695,2.23340227597908,2.70042131586026,3.50773218580315,2.52433774244115,2.66944706062668,2.90962902273861,5.32514388774922,1.41052937518696,1.52604533079439,0.193260853163297,1.09098448236334,0.286804595389004,0,0,0,0,0,0,10.9514672630871,7.07565032012174,4.14404764057442,3.71494342425583,0,0.118306800039844,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.878002283269004,1.1240175325762,0.100528972411631,0.555530670951178,0,0,0,0,0,3.17606185074362,4.62985512576611,4.56609965363036,1.58040879591855,0,0,0,0,0,4.19955320497149,0.850650583454319,0.806026704325635,1.74380363108377,2.30029607499127,0.492663237895943,0,0,0,0,0,0,0,0,0.411309970813294,0,0,0,0.43596006883328,0,0.387815147273333,0,0,3.45719551560332,3.12022310734098,0,0,0.266422179016099,0.142977993658148,0,1.64648067356154,0,0,0,0,0,0,0,0,0,1.4377491329495,0,0,0.579125226670317,0.821905290201534,1.25342674267927,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0.24538298343828,0,0,10.1905722150095,14.0958901149758,5.67728694122165,6.67706065458465,0.902838299183157,0,0,0,2.21243002250044,1.21637060255316,0,0,0.206768026122887,0.215714200818617,0.213455115606889,0,3.32870879020994,1.20956117331872,5.95458738765064,14.1185015425017,17.1202657604175,2.69092213436972,5.62877973973374,6.4341568457443,7.42090332224955,1.85051632563187,1.9531789784444,0.246381468041427,0,0.348631135379878,0,3.60911646545913,0,0.574072240823034,0.364182336013434,0.917870904715969,0,0,0,0,0.105551628892876,0,1.02056223165909,1.94324324491925,3.08454505380579,0,0,0.509752546090077,0,0.447749509444357,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,0.650060246036521,3.21367859688319,0,0,0,0.551346289938122,0.322260734604821,0.290033387828457,0.0852266274161009,0,0.165284915360978,1.15314040419064,1.02090169995667,0.2023155617111,0,2.83331112147576,0,0,0.532306030317022,0,0,0.429374660225974,0.744316738719335,0.316379424718726,0.38126038784765,0,0.42793898803392,0,0,0.359744915166629,1.09814811894422,0.589062011728432,0.606547444719948,0,2.10629228119491,0,0.731140468893853,3.16950440270266,0.272999822815972,0.707027159768564,0,0,2.65375590096488,3.06915619677634,0,1.9676842561399,1.82619339266434,2.16876448669825,1.69017361519345,0.573645408816206,0.589494246078727,3.5667105148125,0,0.211107635297664,0.658589785919804,0,0.349934720244983,0.192444225451024,0.670302275535787,0,0,1.72202149068492,1.68471475667626,1.33029046061003,1.60806380144872,0,0,0,0.476463550915578,0,0,0,0,0.106824071127473,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,3.81991175580304,0.890894042497916,4.30024982938925,0,0,0.111308705022906,0,0,0.19924798825107,0.276283915531148,0,0,0,8.3980688668688,1.25815691606258,0.179021174675609,0,0,0,1.11136990144637,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0.797594390929008,0,0,0,0.957003479195758,1.64875668123352,0,0,0,0,0,0,0,0,0,0,0.32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| ||
|short_description=p@chr15:39874814..39874827,+ | |||
}} | }} |
Latest revision as of 01:13, 25 July 2015
Short description: | p@chr15:39874814..39874827, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:39874814..39874827, + |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.13e-20 | 76 |
endothelial cell of vascular tree | 3.05e-12 | 24 |
skin fibroblast | 1.75e-11 | 23 |
endothelial cell | 1.30e-09 | 36 |
preadipocyte | 3.73e-09 | 12 |
blood vessel endothelial cell | 5.01e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.01e-08 | 18 |
meso-epithelial cell | 1.65e-07 | 45 |
multi fate stem cell | 2.74e-07 | 427 |
somatic stem cell | 3.35e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
vessel | 2.76e-13 | 68 |
integument | 5.65e-11 | 46 |
integumental system | 5.65e-11 | 46 |
skin of body | 8.09e-11 | 41 |
vasculature | 2.34e-10 | 78 |
vascular system | 2.34e-10 | 78 |
splanchnic layer of lateral plate mesoderm | 2.52e-10 | 83 |
epithelial tube open at both ends | 5.48e-10 | 59 |
blood vessel | 5.48e-10 | 59 |
blood vasculature | 5.48e-10 | 59 |
vascular cord | 5.48e-10 | 59 |
omentum | 1.24e-09 | 6 |
peritoneum | 1.24e-09 | 6 |
abdominal cavity | 1.24e-09 | 6 |
visceral peritoneum | 1.24e-09 | 6 |
artery | 6.67e-09 | 42 |
arterial blood vessel | 6.67e-09 | 42 |
arterial system | 6.67e-09 | 42 |
blood vessel endothelium | 5.01e-08 | 18 |
endothelium | 5.01e-08 | 18 |
cardiovascular system endothelium | 5.01e-08 | 18 |
cardiovascular system | 1.33e-07 | 109 |
simple squamous epithelium | 2.57e-07 | 22 |
circulatory system | 3.77e-07 | 112 |
aorta | 4.66e-07 | 21 |
aortic system | 4.66e-07 | 21 |
systemic artery | 6.99e-07 | 33 |
systemic arterial system | 6.99e-07 | 33 |
surface structure | 7.61e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.51e-07 | 5 |
myotonic disease | 2.51e-07 | 5 |
muscle tissue disease | 2.51e-07 | 5 |
myopathy | 2.51e-07 | 5 |
muscular disease | 2.51e-07 | 5 |
myotonic dystrophy | 2.51e-07 | 5 |