FFCP PHASE1:Hg19::chr4:83933999..83934076,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=132660 | |EntrezGene=132660 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25397 | |HGNC=25397 | ||
|TSSclassifier=strong | |||
|UniProt=Q6MZP7 | |UniProt=Q6MZP7 | ||
|association_with_transcript=0bp_to_ENST00000509748,ENST00000510557,NM_001115007,uc010ijv.2_5end | |association_with_transcript=0bp_to_ENST00000509748,ENST00000510557,NM_001115007,uc010ijv.2_5end | ||
|cluster_id=chr4:83933999..83934076,- | |||
|description=CAGE_peak_1_at_LIN54_5end | |description=CAGE_peak_1_at_LIN54_5end | ||
|id=chr4:83933999..83934076,- | |id=chr4:83933999..83934076,- | ||
|ontology_enrichment_celltype=CL:0000763!4.23e-14!112;CL:0000049!4.23e-14!112;CL:0002032!5.87e-10!165;CL:0000837!5.87e-10!165;CL:0000037!1.82e-09!172;CL:0000566!1.82e-09!172;CL:0000988!1.12e-07!182 | |ontology_enrichment_celltype=CL:0000763!4.23e-14!112;CL:0000049!4.23e-14!112;CL:0002032!5.87e-10!165;CL:0000837!5.87e-10!165;CL:0000037!1.82e-09!172;CL:0000566!1.82e-09!172;CL:0000988!1.12e-07!182 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.06e-13,108;CL:0000049,1.06e-13,108;CL:0002032,1.09e-09,161;CL:0000837,1.09e-09,161;CL:0000037,2.70e-09,168;CL:0000988,7.49e-08,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.84e-33!235;DOID:14566!5.63e-32!239;DOID:0050686!2.17e-19!137;DOID:2531!7.48e-18!51;DOID:0060083!7.48e-18!51;DOID:0050687!1.85e-15!143;DOID:1240!3.54e-15!39;DOID:305!1.79e-12!106;DOID:8692!4.64e-11!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;4.74e-12;39!DOID:2531;4.05e-11;51!DOID:0060083;4.05e-11;51!DOID:8692;7.74e-11;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.45e-33,235;DOID:14566,6.23e-32,239;DOID:0050686,1.56e-19,137;DOID:2531,6.26e-18,51;DOID:0060083,6.26e-18,51;DOID:0050687,1.69e-15,143;DOID:1240,3.05e-15,39;DOID:305,1.62e-12,106;DOID:8692,4.18e-11,31 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@LIN54 | |short_description=p1@LIN54 | ||
}} | }} |
Latest revision as of 01:36, 19 September 2015
Short description: | p1@LIN54 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LIN54_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000509748, ENST00000510557, NM_001115007, uc010ijv.2_5end |
EntrezGene: | LIN54 |
HGNC: | 25397 |
UniProt: | Q6MZP7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.06e-13 | 108 |
common myeloid progenitor | 1.06e-13 | 108 |
hematopoietic oligopotent progenitor cell | 1.09e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.09e-09 | 161 |
hematopoietic stem cell | 2.70e-09 | 168 |
hematopoietic cell | 7.49e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.45e-33 | 235 |
disease of cellular proliferation | 6.23e-32 | 239 |
organ system cancer | 1.56e-19 | 137 |
hematologic cancer | 6.26e-18 | 51 |
immune system cancer | 6.26e-18 | 51 |
cell type cancer | 1.69e-15 | 143 |
leukemia | 3.05e-15 | 39 |
carcinoma | 1.62e-12 | 106 |
myeloid leukemia | 4.18e-11 | 31 |