FFCP PHASE1:Hg19::chr5:137673945..137673961,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51307 | |EntrezGene=51307 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1336 | |HGNC=1336 | ||
|TSSclassifier=strong | |||
|UniProt=D6RHW3,D6RE00 | |UniProt=D6RHW3,D6RE00 | ||
|association_with_transcript=0bp_to_ENST00000511024,ENST00000511276,ENST00000513056_5end | |association_with_transcript=0bp_to_ENST00000511024,ENST00000511276,ENST00000513056_5end | ||
|cluster_id=chr5:137673945..137673961,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_FAM53C_5end | |description=CAGE_peak_1_at_FAM53C_5end | ||
|id=chr5:137673945..137673961,+ | |id=chr5:137673945..137673961,+ | ||
|ontology_enrichment_celltype=CL:0000738!3.43e-21!140;CL:0000037!1.78e-19!172;CL:0000566!1.78e-19!172;CL:0000766!1.57e-18!76;CL:0000988!1.12e-17!182;CL:0002057!1.68e-17!42;CL:0002032!8.00e-17!165;CL:0000837!8.00e-17!165;CL:0000763!3.98e-16!112;CL:0000049!3.98e-16!112;CL:0000557!1.59e-15!71;CL:0000860!1.90e-15!45;CL:0002031!7.54e-15!124;CL:0000839!1.08e-14!70;CL:0002009!2.47e-13!65;CL:0002087!3.40e-13!119;CL:0002194!2.41e-12!63;CL:0000576!2.41e-12!63;CL:0000040!2.41e-12!63;CL:0000559!2.41e-12!63 | |ontology_enrichment_celltype=CL:0000738!3.43e-21!140;CL:0000037!1.78e-19!172;CL:0000566!1.78e-19!172;CL:0000766!1.57e-18!76;CL:0000988!1.12e-17!182;CL:0002057!1.68e-17!42;CL:0002032!8.00e-17!165;CL:0000837!8.00e-17!165;CL:0000763!3.98e-16!112;CL:0000049!3.98e-16!112;CL:0000557!1.59e-15!71;CL:0000860!1.90e-15!45;CL:0002031!7.54e-15!124;CL:0000839!1.08e-14!70;CL:0002009!2.47e-13!65;CL:0002087!3.40e-13!119;CL:0002194!2.41e-12!63;CL:0000576!2.41e-12!63;CL:0000040!2.41e-12!63;CL:0000559!2.41e-12!63 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.56e-17;33!CL:0002057;7.56e-17;33!CL:0000473;5.16e-12;39!CL:0000234;5.16e-12;39!CL:0000576;2.06e-09;48!CL:0000766;5.65e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.14e-22,136;CL:0000037,2.66e-20,168;CL:0000766,4.43e-20,72;CL:0000988,5.92e-19,177;CL:0002032,1.38e-17,161;CL:0000837,1.38e-17,161;CL:0000860,1.68e-17,42;CL:0002057,1.68e-17,42;CL:0000763,3.95e-17,108;CL:0000049,3.95e-17,108;CL:0000557,6.13e-17,67;CL:0000839,4.63e-16,66;CL:0002031,1.02e-15,120;CL:0000473,5.32e-15,48;CL:0000234,5.32e-15,48;CL:0002009,1.13e-14,61;CL:0002087,5.20e-14,115;CL:0002194,1.24e-13,59;CL:0000576,1.24e-13,59;CL:0000040,1.24e-13,59;CL:0000559,1.24e-13,59 | |||
|ontology_enrichment_development_v019=CL:0002057;5.85e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.92e-16!102;UBERON:0003061!2.92e-16!102;UBERON:0002193!8.93e-14!112;UBERON:0001474!3.73e-13!86;UBERON:0002371!4.78e-13!80;UBERON:0002405!6.93e-10!115;UBERON:0004765!1.58e-08!101;UBERON:0001434!1.58e-08!101 | |ontology_enrichment_uberon=UBERON:0002390!2.92e-16!102;UBERON:0003061!2.92e-16!102;UBERON:0002193!8.93e-14!112;UBERON:0001474!3.73e-13!86;UBERON:0002371!4.78e-13!80;UBERON:0002405!6.93e-10!115;UBERON:0004765!1.58e-08!101;UBERON:0001434!1.58e-08!101 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.37e-17,98;UBERON:0003061,2.37e-17,98;UBERON:0002193,1.16e-14,108;UBERON:0001474,3.31e-14,82;UBERON:0002371,3.73e-14,76;UBERON:0002405,1.16e-12,93;UBERON:0004765,1.30e-11,90;UBERON:0001434,6.89e-09,100 | |||
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| ||
|short_description=p1@FAM53C | |short_description=p1@FAM53C | ||
}} | }} |
Latest revision as of 22:13, 24 September 2015
Short description: | p1@FAM53C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM53C_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000511024, ENST00000511276, ENST00000513056_5end |
EntrezGene: | FAM53C |
HGNC: | 1336 |
UniProt: | D6RHW3D6RE00 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 3.14e-22 | 136 |
hematopoietic stem cell | 2.66e-20 | 168 |
myeloid leukocyte | 4.43e-20 | 72 |
hematopoietic cell | 5.92e-19 | 177 |
hematopoietic oligopotent progenitor cell | 1.38e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.38e-17 | 161 |
classical monocyte | 1.68e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.68e-17 | 42 |
myeloid cell | 3.95e-17 | 108 |
common myeloid progenitor | 3.95e-17 | 108 |
granulocyte monocyte progenitor cell | 6.13e-17 | 67 |
myeloid lineage restricted progenitor cell | 4.63e-16 | 66 |
hematopoietic lineage restricted progenitor cell | 1.02e-15 | 120 |
defensive cell | 5.32e-15 | 48 |
phagocyte | 5.32e-15 | 48 |
macrophage dendritic cell progenitor | 1.13e-14 | 61 |
nongranular leukocyte | 5.20e-14 | 115 |
monopoietic cell | 1.24e-13 | 59 |
monocyte | 1.24e-13 | 59 |
monoblast | 1.24e-13 | 59 |
promonocyte | 1.24e-13 | 59 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.37e-17 | 98 |
blood island | 2.37e-17 | 98 |
hemolymphoid system | 1.16e-14 | 108 |
bone element | 3.31e-14 | 82 |
bone marrow | 3.73e-14 | 76 |
immune system | 1.16e-12 | 93 |
skeletal element | 1.30e-11 | 90 |
skeletal system | 6.89e-09 | 100 |