FFCP PHASE1:Hg19::chr5:179048896..179048919,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3187 | |EntrezGene=3187 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5041 | |HGNC=5041 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-209bp_to_ENST00000519943_5end | |association_with_transcript=-209bp_to_ENST00000519943_5end | ||
|cluster_id=chr5:179048896..179048919,- | |||
|description=CAGE_peak_18_at_HNRNPH1_5end | |description=CAGE_peak_18_at_HNRNPH1_5end | ||
|id=chr5:179048896..179048919,- | |id=chr5:179048896..179048919,- | ||
|ontology_enrichment_celltype=CL:0000037!8.82e-21!172;CL:0000566!8.82e-21!172;CL:0002087!1.59e-20!119;CL:0000738!2.66e-20!140;CL:0000988!4.93e-20!182;CL:0002032!3.90e-19!165;CL:0000837!3.90e-19!165;CL:0002031!2.26e-18!124;CL:0002057!2.79e-11!42;CL:0000860!2.83e-11!45;CL:0000542!1.09e-10!53;CL:0000051!1.09e-10!53;CL:0000838!3.46e-10!52;CL:0002009!7.40e-10!65;CL:0000763!2.37e-09!112;CL:0000049!2.37e-09!112;CL:0002194!3.03e-09!63;CL:0000576!3.03e-09!63;CL:0000040!3.03e-09!63;CL:0000559!3.03e-09!63;CL:0000557!8.63e-09!71;CL:0000839!2.27e-08!70;CL:0000084!1.52e-07!25;CL:0000827!1.52e-07!25;CL:0000766!1.76e-07!76 | |ontology_enrichment_celltype=CL:0000037!8.82e-21!172;CL:0000566!8.82e-21!172;CL:0002087!1.59e-20!119;CL:0000738!2.66e-20!140;CL:0000988!4.93e-20!182;CL:0002032!3.90e-19!165;CL:0000837!3.90e-19!165;CL:0002031!2.26e-18!124;CL:0002057!2.79e-11!42;CL:0000860!2.83e-11!45;CL:0000542!1.09e-10!53;CL:0000051!1.09e-10!53;CL:0000838!3.46e-10!52;CL:0002009!7.40e-10!65;CL:0000763!2.37e-09!112;CL:0000049!2.37e-09!112;CL:0002194!3.03e-09!63;CL:0000576!3.03e-09!63;CL:0000040!3.03e-09!63;CL:0000559!3.03e-09!63;CL:0000557!8.63e-09!71;CL:0000839!2.27e-08!70;CL:0000084!1.52e-07!25;CL:0000827!1.52e-07!25;CL:0000766!1.76e-07!76 | ||
|ontology_enrichment_celltype_v019=CL:0000084;1.37e-09;25!CL:0000791;1.33e-07;18!CL:0000789;1.33e-07;18!CL:0002419;1.33e-07;18!CL:0000542;1.88e-07;53!CL:0000624;6.98e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.07e-16,168;CL:0000988,3.10e-16,177;CL:0002087,1.38e-15,115;CL:0000738,7.40e-15,136;CL:0002032,7.48e-15,161;CL:0000837,7.48e-15,161;CL:0002031,1.69e-12,120;CL:0000542,7.64e-11,53;CL:0000051,7.64e-11,53;CL:0000838,8.69e-10,52;CL:0000084,1.12e-09,25;CL:0000827,1.12e-09,25;CL:0000791,1.33e-07,18;CL:0000789,1.33e-07,18;CL:0002420,1.33e-07,18;CL:0002419,1.33e-07,18;CL:0000790,1.33e-07,18;CL:0000860,4.97e-07,42;CL:0002057,4.97e-07,42;CL:0000473,6.50e-07,48;CL:0000234,6.50e-07,48;CL:0000624,6.67e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000790;1.33e-07;18!CL:0000051;1.88e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.12e-08!102;UBERON:0003061!2.12e-08!102;UBERON:0002193!5.19e-07!112 | |ontology_enrichment_uberon=UBERON:0002390!2.12e-08!102;UBERON:0003061!2.12e-08!102;UBERON:0002193!5.19e-07!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0002346;1.11e-09;4!UBERON:0000923;1.11e-09;4!UBERON:0010316;1.11e-09;4!UBERON:0005291;1.11e-09;4!UBERON:0002050;9.76e-08;5!UBERON:0005423;9.76e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.43e-07,98;UBERON:0003061,8.43e-07,98 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0.123121058076788,0,0,0,0.136874425072884,0.376627918784408,0.61130724598361,0.246301768349837,0.393553906568396,0,0,0.309632246632152,0.919421224478927,0,0.369754010166788,0.309868802321207,0.568676929949686,0,0.553995408531877,1.00272223735071,0.868043482863407,0.223915474239924,0,0.257575567634187,0.872389432677388,0,0.485168122375632,1.62700325833979,2.05583944010913,0.619412741790207,0.863077176966451,1.2808035326455,0.47296445977717,1.37898272294647,0.645484683583826,1.35426486594342,0.752969358170419,0.818718450173537,1.57306439111559,0.612167784741805,0.320929027076094,1.27867425159808,0,0.997318288108159,0.426224750532694,1.45104619314292,1.13477044938228,0,1.00499466102697,1.0429658368404,0.65156653411535,0.605399502633369,0.736555271975129,0.949387162322653,1.05627643155971,1.06302149982522,0,0.336985893439485,0.450530678524519,0.48217676009124,0.285012743741249,0.39783335439818,0.365328307529268,0,0,0,0,0.400395987036012,0.574752439954483,0,0.954053754535364,3.41527781465669,3.52342313622563,3.05818582500183,0,0,0.790152254325231,0.393419540227666,7.07419372948497,3.70082698199117,0,0.977766799900771,0.946895611469467,1.94826728407911,0.557052284425868,1.17842362989935,0.886135578334485,2.43723477388514,0.384273959177026,0.910415432919148,0.164437904603676,0.552700035571697,0.289803085735052,0.889719378972363,0.535081656179426,0,0.339928028092699,1.53288197440768,1.37450978193052,1.77113784413652,0.637130828648193,1.30216690771284,0.950452044448374,0.150575119077773,0.895906278080929,0,0.236777252044017,0,0.604820229674197,6.68600489458768,4.63438092424957,0,0,0,0,0.50133791063589,0,0,0.486634870302636,0.0945348171640679,0.665188192387692,0.43917392846563,0.130979075497713,0,0,0.649094787309367,0.174129737299267,0.664789802594326,0.953962497221368,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0.66944122552934,0,0,0.732186172644509,0,0.81014194788176,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,1.05927344650575,0.573673241497627,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0.168336113954066,0,0,0,0.30648779579902,0.150238058906597,0,0.717558542755448,0.213557388818567,0.635795703478686,0.600182192168805,0,0.515281080091258,0,0.506328996723799,0.194874010322397,0.504867548488229,0,0.161646056818812,0.710019185033229,0.10075209822764,0.169560592310488,0.193260853163297,0,0,0.487894824518382,0,0.232387885739037,0.310983165046111,0,0.72995471815166,0,0.643240938192885,0,0.928735856063958,0,0.118306800039844,0.337169380156203,0.241011029883482,0.330881918197182,0,0,0.539325232640658,0,0,0,0,0.4115740113314,1.47008711385542,3.80265104465493,1.96565443335525,0.590789906681404,1.7658523976586,0.245976877086227,0,0,0,0.502644862058154,0.185176890317059,0,0,1.44331342025273,0,0.117408694235822,0,0,0.380508304469197,0,0,0,0,0.445893486866185,0,0.335964256397719,0,0.0895585227028483,0,0.383382679165211,0,0.176096868026452,0.414656231081544,0.144119953416961,0.12624243342638,0.063497894292169,0,0,0,0.205654985406647,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.799783929456456,0,0,4.21667878966063,0.239624855491583,0,0,0.289562613335158,0.205476322550383,0.179060963239896,1.34502172792233,0.985153801009636,3.01878604803324,3.20857590699371,0,0,0,0,0,0.749007023947182,2.99161459204025,0,0,0,0,0.207970861530807,0.892144943985809,0.946214490203608,0,0,0,0,0,0,0.0868836144680828,0,0.343143423810856,0.620304078368662,1.72571360654893,1.06727557803444,0,0,0,0,0.153461973288062,0.280660094433074,0,0,0,0,0,0.177561725313127,0,0,0,0.241718899183244,0.200506470303285,0.184161977871793,0.114814448164607,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0.340187410553031,0,0,0,0,0,0,0,0.438519753291869,0,0,0,0,0.206082023295445,0.27470839445503,0.082509499920588,0,0,0,0,0.154048617114644,0.15350367472613,0.275673144969061,0.322260734604821,0,0.255679882248303,0.178064071293475,0.330569830721956,0.192190067365106,0.893288987462089,0.30347334256665,0,0,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0.359744915166629,0.54907405947211,0.235624804691373,0,0,0,0,0.243713489631284,0,0.136499911407986,0.424216295861138,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.376575203107117,0,0,0,0,0.507447609232169,0,1.13929437434833,1.19115887728894,0,0.648473311192717,1.08006287447623,0,0.213648142254946,0,0,1.67222857613147,0.144269212976445,0.426851060090485,0.478278818186467,1.79621434289535,0.191505370132367,0,0.973865820823666,1.68478306868075,2.28234679033192,1.41011906195721,0,0.338583555603207,1.76646882614069,3.43059502224781,0,0,0,0.894704431569664,0,0.19538809540204,0,1.23087398947712,0.540911356951966,0.99921590399346,0,0,0,0,0,0.568272293612826,0,0,1.22864280839693,0.994147647766298,0.281338832821026,0.333926115068718,1.81284261649436,2.95575571379191,0.398495976502139,0.552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| ||
|short_description=p18@HNRNPH1 | |short_description=p18@HNRNPH1 | ||
}} | }} |
Latest revision as of 08:37, 17 September 2015
Short description: | p18@HNRNPH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_HNRNPH1_5end |
Coexpression cluster: | NA |
Association with transcript: | -209bp_to_ENST00000519943_5end |
EntrezGene: | HNRNPH1 |
HGNC: | 5041 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.07e-16 | 168 |
hematopoietic cell | 3.10e-16 | 177 |
nongranular leukocyte | 1.38e-15 | 115 |
leukocyte | 7.40e-15 | 136 |
hematopoietic oligopotent progenitor cell | 7.48e-15 | 161 |
hematopoietic multipotent progenitor cell | 7.48e-15 | 161 |
hematopoietic lineage restricted progenitor cell | 1.69e-12 | 120 |
lymphocyte | 7.64e-11 | 53 |
common lymphoid progenitor | 7.64e-11 | 53 |
lymphoid lineage restricted progenitor cell | 8.69e-10 | 52 |
T cell | 1.12e-09 | 25 |
pro-T cell | 1.12e-09 | 25 |
mature alpha-beta T cell | 1.33e-07 | 18 |
alpha-beta T cell | 1.33e-07 | 18 |
immature T cell | 1.33e-07 | 18 |
mature T cell | 1.33e-07 | 18 |
immature alpha-beta T cell | 1.33e-07 | 18 |
classical monocyte | 4.97e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.97e-07 | 42 |
defensive cell | 6.50e-07 | 48 |
phagocyte | 6.50e-07 | 48 |
CD4-positive, alpha-beta T cell | 6.67e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.43e-07 | 98 |
blood island | 8.43e-07 | 98 |