FFCP PHASE1:Hg19::chr6:10521523..10521533,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2651 | |EntrezGene=2651 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4204 | |HGNC=4204 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=7bp_to_ENST00000498320_5end | |association_with_transcript=7bp_to_ENST00000498320_5end | ||
|cluster_id=chr6:10521523..10521533,+ | |||
|description=CAGE_peak_18_at_GCNT2_5end | |description=CAGE_peak_18_at_GCNT2_5end | ||
|id=chr6:10521523..10521533,+ | |id=chr6:10521523..10521533,+ | ||
|ontology_enrichment_celltype=CL:0000235!2.46e-08!10 | |ontology_enrichment_celltype=CL:0000235!2.46e-08!10 | ||
|ontology_enrichment_celltype_v019=CL:0000235;6.69e-36;6!CL:0000990;8.58e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,5.61e-36,6;CL:0002194,1.08e-07,59;CL:0000576,1.08e-07,59;CL:0000040,1.08e-07,59;CL:0000559,1.08e-07,59;CL:0002009,1.97e-07,61;CL:0000763,4.62e-07,108;CL:0000049,4.62e-07,108;CL:0000839,7.52e-07,66;CL:0000990,8.84e-07,8;CL:0000557,9.61e-07,67 | |||
|ontology_enrichment_development_v019=UBERON:0004140;1.50e-14;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;6.35e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,5.37e-08,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p18@GCNT2 | |short_description=p18@GCNT2 | ||
}} | }} |
Latest revision as of 13:30, 19 September 2015
Short description: | p18@GCNT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_GCNT2_5end |
Coexpression cluster: | NA |
Association with transcript: | 7bp_to_ENST00000498320_5end |
EntrezGene: | GCNT2 |
HGNC: | 4204 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 5.61e-36 | 6 |
monopoietic cell | 1.08e-07 | 59 |
monocyte | 1.08e-07 | 59 |
monoblast | 1.08e-07 | 59 |
promonocyte | 1.08e-07 | 59 |
macrophage dendritic cell progenitor | 1.97e-07 | 61 |
myeloid cell | 4.62e-07 | 108 |
common myeloid progenitor | 4.62e-07 | 108 |
myeloid lineage restricted progenitor cell | 7.52e-07 | 66 |
conventional dendritic cell | 8.84e-07 | 8 |
granulocyte monocyte progenitor cell | 9.61e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
heart disease | 5.37e-08 | 2 |