FFCP PHASE1:Hg19::chr6:29911185..29911196,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3105 | |EntrezGene=3105 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=4931 | |HGNC=4931 | ||
|TSSclassifier=strong | |||
|UniProt=Q29947 | |UniProt=Q29947 | ||
|association_with_transcript=93bp_to_M27539_5end | |association_with_transcript=93bp_to_M27539_5end | ||
|cluster_id=chr6:29911185..29911196,+ | |||
|description=CAGE_peak_9_at_HLA-A_5end | |description=CAGE_peak_9_at_HLA-A_5end | ||
|id=chr6:29911185..29911196,+ | |id=chr6:29911185..29911196,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.20e-16!140;CL:0002087!1.30e-16!119;CL:0002031!3.10e-14!124;CL:0002057!6.51e-13!42;CL:0002194!2.36e-12!63;CL:0000576!2.36e-12!63;CL:0000040!2.36e-12!63;CL:0000559!2.36e-12!63;CL:0000037!2.62e-12!172;CL:0000566!2.62e-12!172;CL:0002032!1.11e-11!165;CL:0000837!1.11e-11!165;CL:0002009!1.18e-11!65;CL:0000766!1.21e-11!76;CL:0000988!1.23e-11!182;CL:0000839!1.25e-11!70;CL:0000860!1.75e-11!45;CL:0000557!2.58e-11!71;CL:0000763!1.56e-07!112;CL:0000049!1.56e-07!112 | |ontology_enrichment_celltype=CL:0000738!1.20e-16!140;CL:0002087!1.30e-16!119;CL:0002031!3.10e-14!124;CL:0002057!6.51e-13!42;CL:0002194!2.36e-12!63;CL:0000576!2.36e-12!63;CL:0000040!2.36e-12!63;CL:0000559!2.36e-12!63;CL:0000037!2.62e-12!172;CL:0000566!2.62e-12!172;CL:0002032!1.11e-11!165;CL:0000837!1.11e-11!165;CL:0002009!1.18e-11!65;CL:0000766!1.21e-11!76;CL:0000988!1.23e-11!182;CL:0000839!1.25e-11!70;CL:0000860!1.75e-11!45;CL:0000557!2.58e-11!71;CL:0000763!1.56e-07!112;CL:0000049!1.56e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.59e-30;33!CL:0002057;7.59e-30;33!CL:0000473;2.85e-27;39!CL:0000234;2.85e-27;39!CL:0000576;7.72e-16;48!CL:0000766;4.42e-13;69!CL:0000763;1.95e-08;100!CL:0002087;2.52e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.67e-32,48;CL:0000234,3.67e-32,48;CL:0000860,1.25e-28,42;CL:0002057,1.25e-28,42;CL:0002194,5.19e-25,59;CL:0000576,5.19e-25,59;CL:0000040,5.19e-25,59;CL:0000559,5.19e-25,59;CL:0002009,4.34e-24,61;CL:0000766,1.27e-22,72;CL:0000839,5.05e-22,66;CL:0000557,1.20e-21,67;CL:0002087,3.96e-16,115;CL:0002031,2.74e-15,120;CL:0000738,1.22e-14,136;CL:0000763,6.80e-14,108;CL:0000049,6.80e-14,108;CL:0002032,1.05e-11,161;CL:0000837,1.05e-11,161;CL:0000037,4.86e-11,168;CL:0000988,2.91e-10,177 | |||
|ontology_enrichment_development_v019=CL:0002057;5.87e-25;42!UBERON:0006242;3.72e-07;1!CL:0000049;9.85e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.43e-11!102;UBERON:0003061!4.43e-11!102;UBERON:0002193!8.73e-11!112;UBERON:0002371!1.21e-09!80;UBERON:0002405!1.82e-09!115;UBERON:0001474!7.35e-09!86 | |ontology_enrichment_uberon=UBERON:0002390!4.43e-11!102;UBERON:0003061!4.43e-11!102;UBERON:0002193!8.73e-11!112;UBERON:0002371!1.21e-09!80;UBERON:0002405!1.82e-09!115;UBERON:0001474!7.35e-09!86 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.07e-18,76;UBERON:0001474,4.36e-17,82;UBERON:0004765,2.86e-15,90;UBERON:0002405,1.14e-14,93;UBERON:0002390,9.49e-14,98;UBERON:0003061,9.49e-14,98;UBERON:0001434,2.09e-13,100;UBERON:0002193,3.66e-12,108 | |||
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| ||
|short_description=p9@HLA-A | |short_description=p9@HLA-A | ||
}} | }} |
Latest revision as of 15:06, 17 September 2015
Short description: | p9@HLA-A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_HLA-A_5end |
Coexpression cluster: | NA |
Association with transcript: | 93bp_to_M27539_5end |
EntrezGene: | HLA-A |
HGNC: | 4931 |
UniProt: | Q29947 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.67e-32 | 48 |
phagocyte | 3.67e-32 | 48 |
classical monocyte | 1.25e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.25e-28 | 42 |
monopoietic cell | 5.19e-25 | 59 |
monocyte | 5.19e-25 | 59 |
monoblast | 5.19e-25 | 59 |
promonocyte | 5.19e-25 | 59 |
macrophage dendritic cell progenitor | 4.34e-24 | 61 |
myeloid leukocyte | 1.27e-22 | 72 |
myeloid lineage restricted progenitor cell | 5.05e-22 | 66 |
granulocyte monocyte progenitor cell | 1.20e-21 | 67 |
nongranular leukocyte | 3.96e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 2.74e-15 | 120 |
leukocyte | 1.22e-14 | 136 |
myeloid cell | 6.80e-14 | 108 |
common myeloid progenitor | 6.80e-14 | 108 |
hematopoietic oligopotent progenitor cell | 1.05e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.05e-11 | 161 |
hematopoietic stem cell | 4.86e-11 | 168 |
hematopoietic cell | 2.91e-10 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.07e-18 | 76 |
bone element | 4.36e-17 | 82 |
skeletal element | 2.86e-15 | 90 |
immune system | 1.14e-14 | 93 |
hematopoietic system | 9.49e-14 | 98 |
blood island | 9.49e-14 | 98 |
skeletal system | 2.09e-13 | 100 |
hemolymphoid system | 3.66e-12 | 108 |