FFCP PHASE1:Hg19::chr6:72922505..72922516,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22999 | |EntrezGene=22999 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17282 | |HGNC=17282 | ||
|TSSclassifier=strong | |||
|UniProt=E9PF48,B7Z2M0,B7Z2Q9,Q3ZCW0,E9PHF5 | |UniProt=E9PF48,B7Z2M0,B7Z2Q9,Q3ZCW0,E9PHF5 | ||
|association_with_transcript=0bp_to_ENST00000401910,NM_001168407,NM_001168408_5end | |association_with_transcript=0bp_to_ENST00000401910,NM_001168407,NM_001168408_5end | ||
|cluster_id=chr6:72922505..72922516,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_33_at_RIMS1_5end | |description=CAGE_peak_33_at_RIMS1_5end | ||
|id=chr6:72922505..72922516,+ | |id=chr6:72922505..72922516,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.27e-147;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004733!1.06e-51!12;UBERON:0002028!1.06e-51!12;UBERON:0007277!1.06e-51!12;UBERON:0004732!9.09e-48!13;UBERON:0002680!1.63e-44!9;UBERON:0001895!1.63e-44!9;UBERON:0010092!1.63e-44!9;UBERON:0003076!1.79e-41!15;UBERON:0003057!1.79e-41!15;UBERON:0002037!4.90e-38!6;UBERON:0006215!4.90e-38!6;UBERON:0001049!1.66e-15!57;UBERON:0005068!1.66e-15!57;UBERON:0006241!1.66e-15!57;UBERON:0007135!1.66e-15!57;UBERON:0002616!5.37e-15!59;UBERON:0001017!1.80e-14!82;UBERON:0003075!5.67e-14!86;UBERON:0007284!5.67e-14!86;UBERON:0005743!8.16e-14!86;UBERON:0002360!1.37e-13!2;UBERON:0000094!1.37e-13!2;UBERON:0007645!1.37e-13!2;UBERON:0002346!2.32e-13!90;UBERON:0002298!2.49e-13!8;UBERON:0000955!1.08e-12!69;UBERON:0006238!1.08e-12!69;UBERON:0000073!1.55e-12!94;UBERON:0001016!1.55e-12!94;UBERON:0007023!1.42e-10!115;UBERON:0000988!1.41e-09!3;UBERON:0001896!1.54e-09!3;UBERON:0005290!1.54e-09!3;UBERON:0010096!1.54e-09!3;UBERON:0000033!3.16e-07!123;UBERON:0004121!4.86e-07!169;UBERON:0000153!6.79e-07!129;UBERON:0007811!6.79e-07!129;UBERON:0000924!7.08e-07!173;UBERON:0006601!7.08e-07!173 | |ontology_enrichment_uberon=UBERON:0004733!1.06e-51!12;UBERON:0002028!1.06e-51!12;UBERON:0007277!1.06e-51!12;UBERON:0004732!9.09e-48!13;UBERON:0002680!1.63e-44!9;UBERON:0001895!1.63e-44!9;UBERON:0010092!1.63e-44!9;UBERON:0003076!1.79e-41!15;UBERON:0003057!1.79e-41!15;UBERON:0002037!4.90e-38!6;UBERON:0006215!4.90e-38!6;UBERON:0001049!1.66e-15!57;UBERON:0005068!1.66e-15!57;UBERON:0006241!1.66e-15!57;UBERON:0007135!1.66e-15!57;UBERON:0002616!5.37e-15!59;UBERON:0001017!1.80e-14!82;UBERON:0003075!5.67e-14!86;UBERON:0007284!5.67e-14!86;UBERON:0005743!8.16e-14!86;UBERON:0002360!1.37e-13!2;UBERON:0000094!1.37e-13!2;UBERON:0007645!1.37e-13!2;UBERON:0002346!2.32e-13!90;UBERON:0002298!2.49e-13!8;UBERON:0000955!1.08e-12!69;UBERON:0006238!1.08e-12!69;UBERON:0000073!1.55e-12!94;UBERON:0001016!1.55e-12!94;UBERON:0007023!1.42e-10!115;UBERON:0000988!1.41e-09!3;UBERON:0001896!1.54e-09!3;UBERON:0005290!1.54e-09!3;UBERON:0010096!1.54e-09!3;UBERON:0000033!3.16e-07!123;UBERON:0004121!4.86e-07!169;UBERON:0000153!6.79e-07!129;UBERON:0007811!6.79e-07!129;UBERON:0000924!7.08e-07!173;UBERON:0006601!7.08e-07!173 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;2.58e-74;6!UBERON:0002680;5.60e-50;9!UBERON:0001895;5.60e-50;9!UBERON:0004733;8.61e-38;12!UBERON:0002028;8.61e-38;12!UBERON:0004732;5.63e-35;13!UBERON:0000073;7.85e-07;53!UBERON:0002616;7.85e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,2.58e-74,6;UBERON:0006215,2.58e-74,6;UBERON:0002680,5.60e-50,9;UBERON:0001895,5.60e-50,9;UBERON:0010092,5.60e-50,9;UBERON:0004733,8.61e-38,12;UBERON:0002028,8.61e-38,12;UBERON:0007277,8.61e-38,12;UBERON:0004732,5.63e-35,13;UBERON:0003076,1.81e-30,15;UBERON:0003057,1.81e-30,15;UBERON:0000073,3.61e-09,53;UBERON:0002616,3.61e-09,53;UBERON:0001049,9.89e-09,56;UBERON:0005068,9.89e-09,56;UBERON:0006241,9.89e-09,56;UBERON:0007135,9.89e-09,56;UBERON:0000955,2.91e-07,68;UBERON:0006238,2.91e-07,68 | |||
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|short_description=p33@RIMS1 | |short_description=p33@RIMS1 | ||
}} | }} |
Latest revision as of 16:39, 19 September 2015
Short description: | p33@RIMS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_33_at_RIMS1_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 0bp_to_ENST00000401910, NM_001168407, NM_001168408_5end |
EntrezGene: | RIMS1 |
HGNC: | 17282 |
UniProt: | E9PF48B7Z2M0B7Z2Q9Q3ZCW0E9PHF5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 2.58e-74 | 6 |
rhombic lip | 2.58e-74 | 6 |
regional part of metencephalon | 5.60e-50 | 9 |
metencephalon | 5.60e-50 | 9 |
future metencephalon | 5.60e-50 | 9 |
segmental subdivision of hindbrain | 8.61e-38 | 12 |
hindbrain | 8.61e-38 | 12 |
presumptive hindbrain | 8.61e-38 | 12 |
segmental subdivision of nervous system | 5.63e-35 | 13 |
posterior neural tube | 1.81e-30 | 15 |
chordal neural plate | 1.81e-30 | 15 |
regional part of nervous system | 3.61e-09 | 53 |
regional part of brain | 3.61e-09 | 53 |
neural tube | 9.89e-09 | 56 |
neural rod | 9.89e-09 | 56 |
future spinal cord | 9.89e-09 | 56 |
neural keel | 9.89e-09 | 56 |
brain | 2.91e-07 | 68 |
future brain | 2.91e-07 | 68 |