FFCP PHASE1:Hg19::chr15:85873537..85873558,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:85873537..85873558,-
|short_description=p1@ENST00000558365
|description=CAGE_peak_1_at_ENST00000558365_5end
|association_with_transcript=1bp_to_ENST000005...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=1bp_to_ENST00000558365_5end | |||
|cluster_id=chr15:85873537..85873558,- | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_1_at_ENST00000558365_5end | |||
|id=chr15:85873537..85873558,- | |||
|ontology_enrichment_celltype=CL:0000945!1.51e-27!24;CL:0000826!1.51e-27!24;CL:0000236!9.06e-19!14;CL:0000542!1.24e-13!53;CL:0000051!1.24e-13!53;CL:0000838!7.72e-13!52;CL:0002551!1.95e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000236;4.08e-62;13!CL:0000945;2.89e-58;24!CL:0000542;1.52e-18;53!CL:0002551;6.52e-15;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.19e-58,24;CL:0000826,2.19e-58,24;CL:0000236,1.04e-57,14;CL:0000838,4.58e-25,52;CL:0000542,1.58e-24,53;CL:0000051,1.58e-24,53;CL:0002551,9.07e-15,6;CL:0002087,2.45e-09,115;CL:0002031,8.19e-09,120;CL:0000738,2.12e-07,136;CL:0000819,7.57e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000051;1.52e-18;53!UBERON:0001045;3.78e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4960;5.68e-07;1!DOID:0070004;5.68e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,5.37e-07,1;DOID:0070004,5.37e-07,1;DOID:0060073,7.57e-07,1;DOID:8675,7.57e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002067;5.44e-10;9!UBERON:0001154;3.78e-07;1!UBERON:0001153;3.78e-07;1!UBERON:0009854;3.78e-07;1!UBERON:0002372;5.68e-07;1!UBERON:0001961;5.68e-07;1!UBERON:0001744;5.68e-07;1!UBERON:0001042;5.68e-07;1!UBERON:0001735;5.68e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002067,6.75e-10,9;UBERON:0004016,6.75e-10,9;UBERON:0010083,6.75e-10,9;UBERON:0001154,4.01e-07,1;UBERON:0001153,4.01e-07,1;UBERON:0001045,4.01e-07,1;UBERON:0002372,6.38e-07,1;UBERON:0001961,6.38e-07,1;UBERON:0001744,6.38e-07,1;UBERON:0001735,6.38e-07,1;UBERON:0000029,7.15e-07,1;UBERON:0002426,9.51e-07,1;UBERON:0003831,9.51e-07,1;UBERON:0003898,9.51e-07,1;UBERON:0004830,9.51e-07,1;UBERON:0003830,9.51e-07,1;UBERON:0005175,9.51e-07,1;UBERON:0001774,9.51e-07,1;UBERON:0001103,9.51e-07,1;UBERON:0010084,9.51e-07,1 | |||
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| ||
|short_description=p1@ENST00000558365 | |||
}} | }} |
Latest revision as of 05:04, 25 July 2015
Short description: | p1@ENST00000558365 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000558365_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 1bp_to_ENST00000558365_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.19e-58 | 24 |
pro-B cell | 2.19e-58 | 24 |
B cell | 1.04e-57 | 14 |
lymphoid lineage restricted progenitor cell | 4.58e-25 | 52 |
lymphocyte | 1.58e-24 | 53 |
common lymphoid progenitor | 1.58e-24 | 53 |
fibroblast of dermis | 9.07e-15 | 6 |
nongranular leukocyte | 2.45e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 8.19e-09 | 120 |
leukocyte | 2.12e-07 | 136 |
B-1 B cell | 7.57e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
dermis | 6.75e-10 | 9 |
dermatome | 6.75e-10 | 9 |
future dermis | 6.75e-10 | 9 |
vermiform appendix | 4.01e-07 | 1 |
caecum | 4.01e-07 | 1 |
midgut | 4.01e-07 | 1 |
tonsil | 6.38e-07 | 1 |
mucosa-associated lymphoid tissue | 6.38e-07 | 1 |
lymphoid tissue | 6.38e-07 | 1 |
tonsillar ring | 6.38e-07 | 1 |
lymph node | 7.15e-07 | 1 |
chest muscle | 9.51e-07 | 1 |
respiratory system muscle | 9.51e-07 | 1 |
skeletal muscle of trunk | 9.51e-07 | 1 |
respiratory system skeletal muscle | 9.51e-07 | 1 |
thoracic segment muscle | 9.51e-07 | 1 |
chest organ | 9.51e-07 | 1 |
muscle of trunk | 9.51e-07 | 1 |
diaphragm | 9.51e-07 | 1 |
future diaphragm | 9.51e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 5.37e-07 | 1 |
myeloma | 5.37e-07 | 1 |
lymphatic system cancer | 7.57e-07 | 1 |
lymphosarcoma | 7.57e-07 | 1 |