FFCP PHASE1:Hg19::chr8:32405821..32405841,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3084 | |EntrezGene=3084 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7997 | |HGNC=7997 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000405005_5end | |association_with_transcript=0bp_to_ENST00000405005_5end | ||
|cluster_id=chr8:32405821..32405841,+ | |||
|description=CAGE_peak_1_at_NRG1_5end | |description=CAGE_peak_1_at_NRG1_5end | ||
|id=chr8:32405821..32405841,+ | |id=chr8:32405821..32405841,+ | ||
|ontology_enrichment_celltype=CL:0000220!7.41e-26!246;CL:0002321!1.51e-25!248;CL:0000055!1.94e-20!180;CL:0000222!9.24e-14!119;CL:0000076!9.94e-14!62;CL:0000066!9.30e-13!254;CL:0000057!2.41e-11!75;CL:0002620!2.12e-09!23;CL:0000680!7.45e-09!57;CL:0000056!7.45e-09!57;CL:0000355!7.45e-09!57;CL:0000393!1.81e-08!60;CL:0000211!1.81e-08!60;CL:0000187!3.54e-08!54;CL:0000183!5.97e-08!59;CL:0000192!1.33e-07!42;CL:0000514!1.33e-07!42;CL:0002076!1.40e-07!43;CL:0000359!1.71e-07!32;CL:0002368!7.73e-07!13 | |ontology_enrichment_celltype=CL:0000220!7.41e-26!246;CL:0002321!1.51e-25!248;CL:0000055!1.94e-20!180;CL:0000222!9.24e-14!119;CL:0000076!9.94e-14!62;CL:0000066!9.30e-13!254;CL:0000057!2.41e-11!75;CL:0002620!2.12e-09!23;CL:0000680!7.45e-09!57;CL:0000056!7.45e-09!57;CL:0000355!7.45e-09!57;CL:0000393!1.81e-08!60;CL:0000211!1.81e-08!60;CL:0000187!3.54e-08!54;CL:0000183!5.97e-08!59;CL:0000192!1.33e-07!42;CL:0000514!1.33e-07!42;CL:0002076!1.40e-07!43;CL:0000359!1.71e-07!32;CL:0002368!7.73e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002620;8.53e-10;23!CL:0002368;1.66e-07;13!CL:0000359;4.95e-07;32!CL:0000076;7.37e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.01e-22,250;CL:0000076,1.61e-12,63;CL:0000222,1.12e-11,121;CL:0000057,2.29e-11,76;CL:0000066,6.20e-11,253;CL:0002620,7.88e-10,23;CL:0000680,6.09e-08,58;CL:0000056,6.09e-08,58;CL:0000355,6.09e-08,58;CL:0002076,1.74e-07,42;CL:0002368,1.92e-07,13;CL:0000359,2.03e-07,32;CL:0000393,2.83e-07,61;CL:0000211,2.83e-07,61;CL:0000187,3.09e-07,55;CL:0000192,4.34e-07,43;CL:0000514,4.34e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!5.36e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.57e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.48e-07,14 | |||
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|ontology_enrichment_uberon_v019=UBERON:0004573;2.28e-11;33!UBERON:0004571;2.28e-11;33!UBERON:0001637;2.86e-11;42!UBERON:0003509;2.86e-11;42!UBERON:0004572;2.86e-11;42!UBERON:0000947;9.05e-09;21!UBERON:0010191;9.05e-09;21!UBERON:0002097;5.61e-08;41!UBERON:0003914;8.45e-08;74!UBERON:0007500;3.64e-07;56!UBERON:0001981;3.64e-07;56!UBERON:0004537;3.64e-07;56 | |||
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| ||
|short_description=p1@NRG1 | |short_description=p1@NRG1 | ||
}} | }} |
Latest revision as of 00:30, 18 September 2015
Short description: | p1@NRG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NRG1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000405005_5end |
EntrezGene: | NRG1 |
HGNC: | 7997 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.01e-22 | 250 |
squamous epithelial cell | 1.61e-12 | 63 |
mesodermal cell | 1.12e-11 | 121 |
fibroblast | 2.29e-11 | 76 |
epithelial cell | 6.20e-11 | 253 |
skin fibroblast | 7.88e-10 | 23 |
muscle precursor cell | 6.09e-08 | 58 |
myoblast | 6.09e-08 | 58 |
multi-potent skeletal muscle stem cell | 6.09e-08 | 58 |
endo-epithelial cell | 1.74e-07 | 42 |
respiratory epithelial cell | 1.92e-07 | 13 |
vascular associated smooth muscle cell | 2.03e-07 | 32 |
electrically responsive cell | 2.83e-07 | 61 |
electrically active cell | 2.83e-07 | 61 |
muscle cell | 3.09e-07 | 55 |
smooth muscle cell | 4.34e-07 | 43 |
smooth muscle myoblast | 4.34e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.48e-07 | 14 |