FFCP PHASE1:Hg19::chr4:186854216..186854237,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8470 | |EntrezGene=8470 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24098 | |HGNC=24098 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=286bp_to_ENST00000488562_5end | |association_with_transcript=286bp_to_ENST00000488562_5end | ||
|cluster_id=chr4:186854216..186854237,- | |||
|coexpression_cluster_id=C139 | |||
|description=CAGE_peak_23_at_SORBS2_5end | |description=CAGE_peak_23_at_SORBS2_5end | ||
|id=chr4:186854216..186854237,- | |id=chr4:186854216..186854237,- | ||
|ontology_enrichment_celltype=CL:0000055!2.35e-18!180;CL:0000057!5.95e-11!75;CL:0002334!2.90e-10!12;CL:0002539!1.47e-09!10;CL:0000680!2.82e-09!57;CL:0000056!2.82e-09!57;CL:0000355!2.82e-09!57;CL:0000359!8.28e-09!32;CL:0000183!4.63e-08!59;CL:0000187!6.75e-08!54;CL:0002570!9.83e-08!8;CL:0000393!3.51e-07!60;CL:0000211!3.51e-07!60 | |ontology_enrichment_celltype=CL:0000055!2.35e-18!180;CL:0000057!5.95e-11!75;CL:0002334!2.90e-10!12;CL:0002539!1.47e-09!10;CL:0000680!2.82e-09!57;CL:0000056!2.82e-09!57;CL:0000355!2.82e-09!57;CL:0000359!8.28e-09!32;CL:0000183!4.63e-08!59;CL:0000187!6.75e-08!54;CL:0002570!9.83e-08!8;CL:0000393!3.51e-07!60;CL:0000211!3.51e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0000569;3.45e-11;4!CL:0002570;2.83e-09;8!CL:0000048;2.55e-07;58!CL:0002539;2.57e-07;10!CL:0000723;2.95e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000569,4.65e-11,4;CL:0000011,4.65e-11,4;CL:0002570,2.81e-09,8;CL:0002539,2.29e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000011;3.45e-11;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;2.06e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.92e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0004237!1.47e-09!10;UBERON:0004695!1.47e-09!10;UBERON:0002111!1.47e-09!10;UBERON:0004178!1.47e-09!10;UBERON:0001134!5.99e-09!61;UBERON:0002036!5.99e-09!61;UBERON:0003082!5.99e-09!61;UBERON:0004872!1.16e-08!84;UBERON:0002385!2.11e-08!63;UBERON:0001015!2.11e-08!63;UBERON:0000383!2.11e-08!63;UBERON:0000914!4.00e-08!83;UBERON:0002329!4.00e-08!83;UBERON:0003077!4.00e-08!83;UBERON:0003059!4.00e-08!83;UBERON:0007282!4.00e-08!83;UBERON:0009618!4.00e-08!83;UBERON:0007285!4.00e-08!83;UBERON:0004290!5.23e-08!70;UBERON:0001637!5.38e-08!42;UBERON:0003509!5.38e-08!42;UBERON:0004572!5.38e-08!42;UBERON:0002616!9.33e-08!59;UBERON:0000947!2.02e-07!21;UBERON:0010191!2.02e-07!21;UBERON:0000955!3.07e-07!69;UBERON:0006238!3.07e-07!69;UBERON:0002118!7.25e-07!5;UBERON:0004532!7.25e-07!5;UBERON:0000486!7.30e-07!82;UBERON:0004535!7.81e-07!110 | |ontology_enrichment_uberon=UBERON:0004237!1.47e-09!10;UBERON:0004695!1.47e-09!10;UBERON:0002111!1.47e-09!10;UBERON:0004178!1.47e-09!10;UBERON:0001134!5.99e-09!61;UBERON:0002036!5.99e-09!61;UBERON:0003082!5.99e-09!61;UBERON:0004872!1.16e-08!84;UBERON:0002385!2.11e-08!63;UBERON:0001015!2.11e-08!63;UBERON:0000383!2.11e-08!63;UBERON:0000914!4.00e-08!83;UBERON:0002329!4.00e-08!83;UBERON:0003077!4.00e-08!83;UBERON:0003059!4.00e-08!83;UBERON:0007282!4.00e-08!83;UBERON:0009618!4.00e-08!83;UBERON:0007285!4.00e-08!83;UBERON:0004290!5.23e-08!70;UBERON:0001637!5.38e-08!42;UBERON:0003509!5.38e-08!42;UBERON:0004572!5.38e-08!42;UBERON:0002616!9.33e-08!59;UBERON:0000947!2.02e-07!21;UBERON:0010191!2.02e-07!21;UBERON:0000955!3.07e-07!69;UBERON:0006238!3.07e-07!69;UBERON:0002118!7.25e-07!5;UBERON:0004532!7.25e-07!5;UBERON:0000486!7.30e-07!82;UBERON:0004535!7.81e-07!110 | ||
|ontology_enrichment_uberon_v019=UBERON:0002118;2.76e-09;5!UBERON:0000992;4.38e-09;13!UBERON:0004237;2.57e-07;10!UBERON:0004695;2.57e-07;10!UBERON:0002111;2.57e-07;10!UBERON:0004178;2.57e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002118,2.16e-09,5;UBERON:0000992,4.07e-09,13;UBERON:0004237,2.29e-07,10;UBERON:0004695,2.29e-07,10;UBERON:0002111,2.29e-07,10;UBERON:0004178,2.29e-07,10 | |||
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| ||
|short_description=p23@SORBS2 | |short_description=p23@SORBS2 | ||
}} | }} |
Latest revision as of 04:12, 17 September 2015
Short description: | p23@SORBS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_SORBS2_5end |
Coexpression cluster: | C139_astrocytoma_skin_salivary_gall_serous_Mallassezderived_renal |
Association with transcript: | 286bp_to_ENST00000488562_5end |
EntrezGene: | SORBS2 |
HGNC: | 24098 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac mesenchymal cell | 4.65e-11 | 4 |
migratory trunk neural crest cell | 4.65e-11 | 4 |
mesenchymal stem cell of adipose | 2.81e-09 | 8 |
aortic smooth muscle cell | 2.29e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
right ovary | 2.16e-09 | 5 |
female gonad | 4.07e-09 | 13 |
blood vessel smooth muscle | 2.29e-07 | 10 |
arterial system smooth muscle | 2.29e-07 | 10 |
artery smooth muscle tissue | 2.29e-07 | 10 |
aorta smooth muscle tissue | 2.29e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.92e-08 | 14 |