FFCP PHASE1:Hg19::chr9:137734427..137734440,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1289 | |EntrezGene=1289 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=2209 | |HGNC=2209 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=332bp_to_BC032405_5end | |association_with_transcript=332bp_to_BC032405_5end | ||
|cluster_id=chr9:137734427..137734440,+ | |||
|coexpression_cluster_id=C396 | |||
|description=CAGE_peak_10_at_COL5A1_5end | |description=CAGE_peak_10_at_COL5A1_5end | ||
|id=chr9:137734427..137734440,+ | |id=chr9:137734427..137734440,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.24e-29!180;CL:0000057!2.97e-18!75;CL:0000183!3.64e-11!59;CL:0000680!8.02e-11!57;CL:0000056!8.02e-11!57;CL:0000355!8.02e-11!57;CL:0000144!2.00e-10!625;CL:0000187!4.82e-10!54;CL:0002371!9.49e-10!591;CL:0000048!1.24e-09!430;CL:0000723!4.40e-09!436;CL:0002334!8.88e-09!12;CL:0000499!9.40e-09!27;CL:0000393!1.00e-08!60;CL:0000211!1.00e-08!60;CL:0000034!1.53e-08!444;CL:0000192!5.47e-07!42;CL:0000514!5.47e-07!42;CL:0000222!6.29e-07!119;CL:0000548!6.78e-07!679;CL:0000004!6.78e-07!679;CL:0000255!6.78e-07!679;CL:0002570!8.71e-07!8 | |ontology_enrichment_celltype=CL:0000055!1.24e-29!180;CL:0000057!2.97e-18!75;CL:0000183!3.64e-11!59;CL:0000680!8.02e-11!57;CL:0000056!8.02e-11!57;CL:0000355!8.02e-11!57;CL:0000144!2.00e-10!625;CL:0000187!4.82e-10!54;CL:0002371!9.49e-10!591;CL:0000048!1.24e-09!430;CL:0000723!4.40e-09!436;CL:0002334!8.88e-09!12;CL:0000499!9.40e-09!27;CL:0000393!1.00e-08!60;CL:0000211!1.00e-08!60;CL:0000034!1.53e-08!444;CL:0000192!5.47e-07!42;CL:0000514!5.47e-07!42;CL:0000222!6.29e-07!119;CL:0000548!6.78e-07!679;CL:0000004!6.78e-07!679;CL:0000255!6.78e-07!679;CL:0002570!8.71e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000349;6.04e-17;19!CL:0000134;1.19e-09;55!CL:0002570;1.39e-09;8!CL:0002620;2.87e-09;23!CL:0002334;4.25e-09;12!CL:0002537;2.64e-08;5!CL:0000048;4.14e-08;58!CL:0000499;5.84e-08;28!CL:0000057;6.03e-08;73!CL:0000723;1.70e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.62e-20,76;CL:0000349,4.70e-17,19;CL:0000048,8.72e-13,427;CL:0000723,2.80e-12,433;CL:0000034,1.26e-11,441;CL:0002320,3.76e-11,361;CL:0000134,1.11e-10,354;CL:0002570,9.51e-10,8;CL:0002334,4.79e-09,12;CL:0002620,4.99e-09,23;CL:0000219,5.67e-09,386;CL:0002537,4.51e-08,5;CL:0000499,5.49e-08,28 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!7.07e-11!61;UBERON:0002036!7.07e-11!61;UBERON:0003082!7.07e-11!61;UBERON:0002385!1.24e-10!63;UBERON:0001015!1.24e-10!63;UBERON:0000383!1.24e-10!63;UBERON:0000478!2.35e-09!24;UBERON:0005631!7.84e-09!14;UBERON:0000158!7.84e-09!14;UBERON:0000914!1.68e-08!83;UBERON:0002329!1.68e-08!83;UBERON:0003077!1.68e-08!83;UBERON:0003059!1.68e-08!83;UBERON:0007282!1.68e-08!83;UBERON:0009618!1.68e-08!83;UBERON:0007285!1.68e-08!83;UBERON:0004290!1.81e-08!70;UBERON:0000486!3.71e-07!82;UBERON:0001013!4.26e-07!14;UBERON:0004872!7.78e-07!84;UBERON:0004871!8.44e-07!8 | |ontology_enrichment_uberon=UBERON:0001134!7.07e-11!61;UBERON:0002036!7.07e-11!61;UBERON:0003082!7.07e-11!61;UBERON:0002385!1.24e-10!63;UBERON:0001015!1.24e-10!63;UBERON:0000383!1.24e-10!63;UBERON:0000478!2.35e-09!24;UBERON:0005631!7.84e-09!14;UBERON:0000158!7.84e-09!14;UBERON:0000914!1.68e-08!83;UBERON:0002329!1.68e-08!83;UBERON:0003077!1.68e-08!83;UBERON:0003059!1.68e-08!83;UBERON:0007282!1.68e-08!83;UBERON:0009618!1.68e-08!83;UBERON:0007285!1.68e-08!83;UBERON:0004290!1.81e-08!70;UBERON:0000486!3.71e-07!82;UBERON:0001013!4.26e-07!14;UBERON:0004872!7.78e-07!84;UBERON:0004871!8.44e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.14e-14;24!UBERON:0005631;2.52e-12;10!UBERON:0000158;2.52e-12;10!UBERON:0000305;5.63e-11;7!UBERON:0001013;1.12e-10;14!UBERON:0002384;4.32e-08;198!UBERON:0003688;1.07e-07;6!UBERON:0002358;1.07e-07;6!UBERON:0003684;1.07e-07;6!UBERON:0001178;1.07e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000478,9.25e-15,24;UBERON:0005631,9.41e-13,14;UBERON:0000158,9.41e-13,14;UBERON:0004871,2.79e-12,8;UBERON:0002384,5.60e-12,371;UBERON:0001013,7.24e-11,14;UBERON:0000305,1.18e-10,7;UBERON:0003688,9.00e-08,6;UBERON:0002358,9.00e-08,6;UBERON:0003684,9.00e-08,6;UBERON:0001178,9.00e-08,6;UBERON:0004923,8.85e-07,66 | |||
|phase1_expression=1.63510541343501,2.14100523890983,1.55049844505568,3.00219895059391,0.893922188854576,2.61701557230111,2.53299878168311,0,0,0,0.697801167972428,1.52908960491121,2.11013582582763,0.37129905888014,0,0,0.602694528023977,1.46062018077475,0.975865597581014,0.61560529038394,0.612002073732759,1.25381888591235,0.286235987131057,0.136874425072884,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.68280343881454,1.2786256184353,2.1686349143074,0,2.02785126545153,6.36228757640879,9.73269740605272,0.378139268656271,0.443458794925128,0.527008714158756,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10047216776027,0,0,0,0,0,0,0,0.367663080345869,0.81014194788176,0.17859945656816,0,0.112611480483322,0,0,0.183201743930407,0,0,0,4.96971951695318,1.64619665163954,1.58891016975863,4.01571269048339,0.354668382198357,1.12135520028461,0,3.20667812942308,0,0.404132016209064,0.326923806226917,2.8757911252537,2.30470369792,0.234321431833797,0,0,0,0,0,0,0.816616685019573,0.122834317311768,0.103325781175765,1.18800285728205,0.247266929278557,0,0.718618141816238,0.336672227908132,0.125118519871964,0,0,1.83892677479412,0.300476117813194,1.02088964844019,1.61450672119976,2.13557388818567,2.33125091275518,2.70081986475962,0.824420233907511,2.31876486041066,1.48893485065272,1.0126579934476,1.26668106709558,2.27190396819703,1.74894807420369,1.13152239773168,3.55009592516614,1.20902517873168,0.847802961552438,0,0,0,0,0.132529768321485,0.116193942869518,0,0,0,0,2.57296375277154,0,0.928735856063958,0,0.236613600079688,0.674338760312407,0,0.55146986366197,0.217879444092406,0,0.269662616320329,0,0,0,0,1.6462960453256,4.41026134156626,0,0,0,0,0,0.343135620597051,0.109750285408626,0,0,0,0,0,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0.503946384596579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,1.30788020649984,0.2933531432838,1.93907573636667,7.15312891703765,2.535908257668,1.32969058292435,1.04007436911366,0.257207374262142,0,0.266422179016099,4.14636181608628,22.2474858210492,1.64648067356154,0.977208552881205,6.39705507736582,0.791951872933429,0.602878754119172,0,0.299918973546171,0,0,0,1.67737398844108,0,0,0.868687840005475,0.410952645100767,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.36807447515742,0,0.271265023699736,2.28767947683888,4.28229573113188,2.68094105557689,2.6942525448324,0.300946099727719,0,2.0694614258501,1.32845119707087,1.10621501125022,0.695068915744663,1.37060810223918,2.05886054286514,0,0,0,0.909382714338778,4.99306318531491,3.0239029332968,2.48107807818777,5.06424511850606,5.61320188866147,2.81906128362542,3.58195074346692,4.82561763430822,7.42090332224955,0.308419387605311,0.710246901252508,0.574890092096664,0.519254429183621,1.04589340613963,0,0.200506470303285,0,1.49258782613989,0.546273504020151,0.524497659837696,0,0.0770153371044148,0,0,0.316654886678627,0,0,0.215915916102139,0,0.541892875087706,0.501689773854853,0,0,0,0,0,0,0,0,0,0.54941678891006,0.330037999682352,0,0,3.21367859688319,0.290012154876366,0.308097234229289,0.307007349452259,0.137836572484531,0.644521469209642,0.725083469571143,0.170453254832202,1.69160867728801,0.165284915360978,0,0.127612712494584,0.2023155617111,1.39453664789186,5.66662224295152,0.6970372701606,0.308033580176089,0,0,0.74129687641568,0.143124886741991,1.86079184679834,0,0.953150969619124,0.255897791311334,0.42793898803392,0.636406495851874,0,1.97859703341646,0.823611089208164,0.824686816419805,0,0,0,1.46290121726877,1.21856744815642,1.05650146756755,0.136499911407986,1.55545975149084,0,1.10273068709225,0,0,0,0.655894752046633,0.405820753925408,0.30982349809975,0.281695602532241,0.860468113224309,3.43871643545924,0.7133421029625,0.709522128141196,0.633322905892992,0.987884678879706,0.379473173765715,0.699869440489966,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.568272293612826,3.10367830158997,2.67268212749375,1.53580351049616,0,0,0,0,0,0,0,0,0.613612095012929,0,1.55519793830904,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0.538651809526579,0.683652335082007,0,0,0,1.5950057986596,0.732780747214898,6.39641731222362,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.0884575645033392,0.611030144933625,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0.51595809741485,0.19351266257817,0.0730893170861856,0.0821154570532092,0.0969890164884194,0,0,0.274083849293502,0.19871461170299,0,0,0,0,0.799238438328521,0,0,0,0,0,0,0.271808412147228,0.732219924186332,0.305994652908965,0,0,0,0,0.859530882839914,0,0.558564802544508,0,0,0,0,0,0.335917362433631,2.52209918479682,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0.157363764404994,0,0,0.383830394638891,0,0.662091970365432,0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| ||
|short_description=p10@COL5A1 | |short_description=p10@COL5A1 | ||
}} | }} |
Latest revision as of 09:21, 16 September 2015
Short description: | p10@COL5A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_COL5A1_5end |
Coexpression cluster: | C396_Mesenchymal_Chondrocyte_Smooth_Preadipocyte_Placental_Fibroblast_Hepatic |
Association with transcript: | 332bp_to_BC032405_5end |
EntrezGene: | COL5A1 |
HGNC: | 2209 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.62e-20 | 76 |
extraembryonic cell | 4.70e-17 | 19 |
multi fate stem cell | 8.72e-13 | 427 |
somatic stem cell | 2.80e-12 | 433 |
stem cell | 1.26e-11 | 441 |
connective tissue cell | 3.76e-11 | 361 |
mesenchymal cell | 1.11e-10 | 354 |
mesenchymal stem cell of adipose | 9.51e-10 | 8 |
preadipocyte | 4.79e-09 | 12 |
skin fibroblast | 4.99e-09 | 23 |
motile cell | 5.67e-09 | 386 |
amnion mesenchymal stem cell | 4.51e-08 | 5 |
stromal cell | 5.49e-08 | 28 |
Ontology term | p-value | n |
---|---|---|
extraembryonic structure | 9.25e-15 | 24 |
extraembryonic membrane | 9.41e-13 | 14 |
membranous layer | 9.41e-13 | 14 |
somatic layer of lateral plate mesoderm | 2.79e-12 | 8 |
connective tissue | 5.60e-12 | 371 |
adipose tissue | 7.24e-11 | 14 |
amnion | 1.18e-10 | 7 |
omentum | 9.00e-08 | 6 |
peritoneum | 9.00e-08 | 6 |
abdominal cavity | 9.00e-08 | 6 |
visceral peritoneum | 9.00e-08 | 6 |
organ component layer | 8.85e-07 | 66 |