FFCP PHASE1:Hg19::chr4:4291861..4291913,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55646 | |EntrezGene=55646 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26021 | |HGNC=26021 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NX58 | |UniProt=Q9NX58 | ||
|association_with_transcript=0bp_to_ENST00000343470,NM_017816,uc003ght.2_5end | |association_with_transcript=0bp_to_ENST00000343470,NM_017816,uc003ght.2_5end | ||
|cluster_id=chr4:4291861..4291913,- | |||
|description=CAGE_peak_1_at_LYAR_5end | |description=CAGE_peak_1_at_LYAR_5end | ||
|id=chr4:4291861..4291913,- | |id=chr4:4291861..4291913,- | ||
|ontology_enrichment_celltype=CL:0002032!2.07e-15!165;CL:0000837!2.07e-15!165;CL:0000037!9.96e-15!172;CL:0000566!9.96e-15!172;CL:0000988!6.55e-13!182;CL:0002087!2.11e-10!119;CL:0002031!3.27e-10!124;CL:0000763!6.85e-09!112;CL:0000049!6.85e-09!112;CL:0000063!4.28e-08!578;CL:0000860!5.98e-08!45;CL:0002057!3.95e-07!42;CL:0000542!4.03e-07!53;CL:0000051!4.03e-07!53;CL:0000738!8.05e-07!140 | |ontology_enrichment_celltype=CL:0002032!2.07e-15!165;CL:0000837!2.07e-15!165;CL:0000037!9.96e-15!172;CL:0000566!9.96e-15!172;CL:0000988!6.55e-13!182;CL:0002087!2.11e-10!119;CL:0002031!3.27e-10!124;CL:0000763!6.85e-09!112;CL:0000049!6.85e-09!112;CL:0000063!4.28e-08!578;CL:0000860!5.98e-08!45;CL:0002057!3.95e-07!42;CL:0000542!4.03e-07!53;CL:0000051!4.03e-07!53;CL:0000738!8.05e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.50e-07;33!CL:0002057;3.50e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002032,5.75e-15,161;CL:0000837,5.75e-15,161;CL:0000037,2.75e-14,168;CL:0000988,8.82e-13,177;CL:0002087,5.23e-10,115;CL:0002031,8.06e-10,120;CL:0000763,1.64e-08,108;CL:0000049,1.64e-08,108;CL:0000860,3.95e-07,42;CL:0002057,3.95e-07,42;CL:0000542,4.03e-07,53;CL:0000051,4.03e-07,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.93e-36!235;DOID:14566!3.54e-36!239;DOID:2531!2.85e-22!51;DOID:0060083!2.85e-22!51;DOID:0050686!7.73e-19!137;DOID:1240!1.43e-18!39;DOID:0050687!1.78e-17!143;DOID:305!2.19e-14!106;DOID:8692!2.93e-14!31 | |ontology_enrichment_disease=DOID:162!2.93e-36!235;DOID:14566!3.54e-36!239;DOID:2531!2.85e-22!51;DOID:0060083!2.85e-22!51;DOID:0050686!7.73e-19!137;DOID:1240!1.43e-18!39;DOID:0050687!1.78e-17!143;DOID:305!2.19e-14!106;DOID:8692!2.93e-14!31 | ||
|ontology_enrichment_disease_v019=DOID:1240;1.62e-14;39!DOID:2531;5.64e-14;51!DOID:0060083;5.64e-14;51!DOID:8692;7.62e-14;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.93e-36,235;DOID:14566,3.54e-36,239;DOID:2531,2.85e-22,51;DOID:0060083,2.85e-22,51;DOID:0050686,7.73e-19,137;DOID:1240,1.43e-18,39;DOID:0050687,1.78e-17,143;DOID:305,2.19e-14,106;DOID:8692,2.93e-14,31 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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382765039 | ||
|short_description=p1@LYAR | |short_description=p1@LYAR | ||
}} | }} |
Latest revision as of 20:36, 17 September 2015
Short description: | p1@LYAR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LYAR_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000343470, NM_017816, uc003ght.2_5end |
EntrezGene: | LYAR |
HGNC: | 26021 |
UniProt: | Q9NX58 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic oligopotent progenitor cell | 5.75e-15 | 161 |
hematopoietic multipotent progenitor cell | 5.75e-15 | 161 |
hematopoietic stem cell | 2.75e-14 | 168 |
hematopoietic cell | 8.82e-13 | 177 |
nongranular leukocyte | 5.23e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 8.06e-10 | 120 |
myeloid cell | 1.64e-08 | 108 |
common myeloid progenitor | 1.64e-08 | 108 |
classical monocyte | 3.95e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.95e-07 | 42 |
lymphocyte | 4.03e-07 | 53 |
common lymphoid progenitor | 4.03e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.93e-36 | 235 |
disease of cellular proliferation | 3.54e-36 | 239 |
hematologic cancer | 2.85e-22 | 51 |
immune system cancer | 2.85e-22 | 51 |
organ system cancer | 7.73e-19 | 137 |
leukemia | 1.43e-18 | 39 |
cell type cancer | 1.78e-17 | 143 |
carcinoma | 2.19e-14 | 106 |
myeloid leukemia | 2.93e-14 | 31 |