FFCP PHASE1:Hg19::chr9:75568126..75568136,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=216 | |EntrezGene=216 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=402 | |HGNC=402 | ||
|TSSclassifier=strong | |||
|UniProt=P00352 | |UniProt=P00352 | ||
|association_with_transcript=96bp_to_NM_000689_5end | |association_with_transcript=96bp_to_NM_000689_5end | ||
|cluster_id=chr9:75568126..75568136,- | |||
|coexpression_cluster_id=C115 | |||
|description=CAGE_peak_13_at_ALDH1A1_5end | |description=CAGE_peak_13_at_ALDH1A1_5end | ||
|id=chr9:75568126..75568136,- | |id=chr9:75568126..75568136,- | ||
|ontology_enrichment_celltype=CL:0000181!4.55e-10!12;CL:0000417!4.55e-10!12;CL:0000668!4.55e-10!12;CL:0000414!4.55e-10!12;CL:0000412!4.55e-10!12;CL:0000182!4.55e-10!12;CL:0002563!2.31e-08!4 | |ontology_enrichment_celltype=CL:0000181!4.55e-10!12;CL:0000417!4.55e-10!12;CL:0000668!4.55e-10!12;CL:0000414!4.55e-10!12;CL:0000412!4.55e-10!12;CL:0000182!4.55e-10!12;CL:0002563!2.31e-08!4 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:178!7.75e-09!1;DOID:326!7.75e-09!1;DOID:3978!7.75e-09!1;DOID:3394!7.75e-09!1;DOID:5844!7.75e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:5409;1.00e-13;4!DOID:1325;2.03e-08;7!DOID:3904;2.03e-08;7!DOID:3905;7.91e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.13e-13,4;DOID:1325,2.18e-08,7;DOID:3904,2.18e-08,7;DOID:3905,8.37e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0000007!1.01e-16!2;UBERON:0004921!5.80e-10!129;UBERON:0004185!5.80e-10!129;UBERON:0001301!8.36e-09!1;UBERON:0003296!8.38e-09!4;UBERON:0010133!8.38e-09!4;UBERON:0002372!2.06e-08!1;UBERON:0001961!2.06e-08!1;UBERON:0001744!2.06e-08!1;UBERON:0001735!2.06e-08!1;UBERON:0001242!2.31e-08!4;UBERON:0001262!2.31e-08!4;UBERON:0004786!2.31e-08!4;UBERON:0004808!2.31e-08!4;UBERON:0001277!2.31e-08!4;UBERON:0001007!7.70e-08!155;UBERON:0001555!7.70e-08!155;UBERON:0007026!7.70e-08!155;UBERON:0005911!2.13e-07!82;UBERON:0002368!2.90e-07!35;UBERON:0004119!5.74e-07!169;UBERON:0000925!5.74e-07!169;UBERON:0006595!5.74e-07!169;UBERON:0003350!7.48e-07!5 | |ontology_enrichment_uberon=UBERON:0000007!1.01e-16!2;UBERON:0004921!5.80e-10!129;UBERON:0004185!5.80e-10!129;UBERON:0001301!8.36e-09!1;UBERON:0003296!8.38e-09!4;UBERON:0010133!8.38e-09!4;UBERON:0002372!2.06e-08!1;UBERON:0001961!2.06e-08!1;UBERON:0001744!2.06e-08!1;UBERON:0001735!2.06e-08!1;UBERON:0001242!2.31e-08!4;UBERON:0001262!2.31e-08!4;UBERON:0004786!2.31e-08!4;UBERON:0004808!2.31e-08!4;UBERON:0001277!2.31e-08!4;UBERON:0001007!7.70e-08!155;UBERON:0001555!7.70e-08!155;UBERON:0007026!7.70e-08!155;UBERON:0005911!2.13e-07!82;UBERON:0002368!2.90e-07!35;UBERON:0004119!5.74e-07!169;UBERON:0000925!5.74e-07!169;UBERON:0006595!5.74e-07!169;UBERON:0003350!7.48e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0000007;9.38e-99;2!UBERON:0003296;4.00e-50;4!UBERON:0010133;4.00e-50;4!UBERON:0001894;3.16e-29;7!UBERON:0000945;3.60e-11;5!UBERON:0010039;3.60e-11;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,5.68e-99,2;UBERON:0003296,3.11e-50,4;UBERON:0010133,3.11e-50,4;UBERON:0001894,2.74e-29,7;UBERON:0006222,2.74e-29,7;UBERON:0000945,1.80e-07,8;UBERON:0010039,1.80e-07,8;UBERON:0002368,9.98e-07,35 | |||
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|short_description=p13@ALDH1A1 | |short_description=p13@ALDH1A1 | ||
}} | }} |
Latest revision as of 20:13, 17 September 2015
Short description: | p13@ALDH1A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_ALDH1A1_5end |
Coexpression cluster: | C115_pituitary_Neural_caudate_putamen_amygdala_medulla_hippocampus |
Association with transcript: | 96bp_to_NM_000689_5end |
EntrezGene: | ALDH1A1 |
HGNC: | 402 |
UniProt: | P00352 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pituitary gland | 5.68e-99 | 2 |
gland of diencephalon | 3.11e-50 | 4 |
neuroendocrine gland | 3.11e-50 | 4 |
diencephalon | 2.74e-29 | 7 |
future diencephalon | 2.74e-29 | 7 |
stomach | 1.80e-07 | 8 |
food storage organ | 1.80e-07 | 8 |
endocrine gland | 9.98e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.13e-13 | 4 |
bronchus cancer | 2.18e-08 | 7 |
bronchogenic carcinoma | 2.18e-08 | 7 |
lung carcinoma | 8.37e-07 | 9 |