FFCP PHASE1:Hg19::chr4:87770519..87770542,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=345274 | |EntrezGene=345274 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30603 | |HGNC=30603 | ||
|TSSclassifier=strong | |||
|UniProt=Q3KNW5 | |UniProt=Q3KNW5 | ||
|association_with_transcript=-103bp_to_ENST00000273905,NM_197965,uc003hqd.2_5end | |association_with_transcript=-103bp_to_ENST00000273905,NM_197965,uc003hqd.2_5end | ||
|cluster_id=chr4:87770519..87770542,- | |||
|description=CAGE_peak_1_at_SLC10A6_5end | |description=CAGE_peak_1_at_SLC10A6_5end | ||
|id=chr4:87770519..87770542,- | |id=chr4:87770519..87770542,- | ||
|ontology_enrichment_celltype=CL:0002159!8.78e-08!13;CL:0002621!6.36e-07!3 | |ontology_enrichment_celltype=CL:0002159!8.78e-08!13;CL:0002621!6.36e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000622;3.26e-17;5!CL:0002621;3.96e-17;3!CL:0000154;2.26e-14;6!CL:0000317;7.60e-12;2!CL:1000448;7.60e-12;2!CL:0002308;7.60e-12;2!CL:0002140;7.60e-12;2!CL:0000362;4.70e-10;9!CL:0000150;1.27e-09;9!CL:0002328;7.19e-08;3!CL:0002623;7.19e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,3.88e-17,5;CL:0002621,4.20e-17,3;CL:0000154,2.61e-14,6;CL:0000317,8.06e-12,2;CL:1000448,8.06e-12,2;CL:0002308,8.06e-12,2;CL:0002140,8.06e-12,2;CL:0000362,4.83e-10,9;CL:0000150,1.39e-09,9;CL:0002328,4.10e-08,3;CL:0002623,8.00e-08,3;CL:0002076,6.89e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0006965;9.96e-12;2!UBERON:0009143;7.17e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.94e-48!115;UBERON:0001049!9.02e-14!57;UBERON:0005068!9.02e-14!57;UBERON:0006241!9.02e-14!57;UBERON:0007135!9.02e-14!57;UBERON:0000153!1.14e-13!129;UBERON:0007811!1.14e-13!129;UBERON:0002298!1.74e-12!8;UBERON:0002616!7.55e-12!59;UBERON:0000033!1.59e-11!123;UBERON:0002346!6.18e-10!90;UBERON:0003075!6.30e-10!86;UBERON:0007284!6.30e-10!86;UBERON:0000955!8.26e-10!69;UBERON:0006238!8.26e-10!69;UBERON:0003080!9.43e-10!42;UBERON:0000924!8.54e-09!173;UBERON:0006601!8.54e-09!173;UBERON:0002780!9.43e-09!41;UBERON:0001890!9.43e-09!41;UBERON:0006240!9.43e-09!41;UBERON:0001017!9.72e-09!82;UBERON:0004121!1.11e-08!169;UBERON:0002020!1.26e-08!34;UBERON:0003528!1.26e-08!34;UBERON:0002308!3.39e-08!9;UBERON:0000125!3.39e-08!9;UBERON:0005743!5.15e-08!86;UBERON:0002791!9.99e-08!33;UBERON:0001893!2.11e-07!34;UBERON:0001949!6.36e-07!3;UBERON:0003056!7.95e-07!61 | |ontology_enrichment_uberon=UBERON:0007023!6.94e-48!115;UBERON:0001049!9.02e-14!57;UBERON:0005068!9.02e-14!57;UBERON:0006241!9.02e-14!57;UBERON:0007135!9.02e-14!57;UBERON:0000153!1.14e-13!129;UBERON:0007811!1.14e-13!129;UBERON:0002298!1.74e-12!8;UBERON:0002616!7.55e-12!59;UBERON:0000033!1.59e-11!123;UBERON:0002346!6.18e-10!90;UBERON:0003075!6.30e-10!86;UBERON:0007284!6.30e-10!86;UBERON:0000955!8.26e-10!69;UBERON:0006238!8.26e-10!69;UBERON:0003080!9.43e-10!42;UBERON:0000924!8.54e-09!173;UBERON:0006601!8.54e-09!173;UBERON:0002780!9.43e-09!41;UBERON:0001890!9.43e-09!41;UBERON:0006240!9.43e-09!41;UBERON:0001017!9.72e-09!82;UBERON:0004121!1.11e-08!169;UBERON:0002020!1.26e-08!34;UBERON:0003528!1.26e-08!34;UBERON:0002308!3.39e-08!9;UBERON:0000125!3.39e-08!9;UBERON:0005743!5.15e-08!86;UBERON:0002791!9.99e-08!33;UBERON:0001893!2.11e-07!34;UBERON:0001949!6.36e-07!3;UBERON:0003056!7.95e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0001949;3.96e-17;3!UBERON:0002419;7.60e-12;2!UBERON:0007771;7.60e-12;2!UBERON:0003297;7.60e-12;2!UBERON:0001821;7.60e-12;2!UBERON:0003487;7.60e-12;2!UBERON:0001820;7.60e-12;2!UBERON:0000165;6.52e-11;28!UBERON:0000161;1.39e-09;19!UBERON:0000166;1.39e-09;19!UBERON:0001723;7.19e-08;3!UBERON:0004815;7.19e-08;3!UBERON:0002031;7.19e-08;3!UBERON:0001033;7.19e-08;3!UBERON:0010371;1.05e-07;31!UBERON:0003929;1.32e-07;7!UBERON:0000996;5.42e-07;1!UBERON:0002038;7.17e-07;1!UBERON:0009661;7.17e-07;1!UBERON:0002950;7.17e-07;1!UBERON:0001891;7.17e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,4.20e-17,3;UBERON:0000166,4.11e-14,22;UBERON:0000161,6.22e-13,36;UBERON:0002419,8.06e-12,2;UBERON:0007771,8.06e-12,2;UBERON:0003297,8.06e-12,2;UBERON:0001821,8.06e-12,2;UBERON:0003487,8.06e-12,2;UBERON:0001820,8.06e-12,2;UBERON:0005089,8.06e-12,2;UBERON:0005088,8.06e-12,2;UBERON:0007023,3.98e-11,114;UBERON:0000165,2.04e-10,29;UBERON:0000930,2.04e-10,29;UBERON:0004815,4.10e-08,3;UBERON:0002031,4.10e-08,3;UBERON:0001723,6.72e-08,3;UBERON:0001033,6.72e-08,3;UBERON:0010056,6.72e-08,3;UBERON:0001004,8.42e-08,74;UBERON:0003102,1.11e-07,99;UBERON:0000996,4.85e-07,1;UBERON:0002038,8.03e-07,1;UBERON:0009661,8.03e-07,1;UBERON:0002950,8.03e-07,1;UBERON:0001891,8.03e-07,1;UBERON:0009616,8.03e-07,1;UBERON:0010286,8.03e-07,1 | |||
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| ||
|short_description=p1@SLC10A6 | |short_description=p1@SLC10A6 | ||
}} | }} |
Latest revision as of 04:31, 19 September 2015
Short description: | p1@SLC10A6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC10A6_5end |
Coexpression cluster: | NA |
Association with transcript: | -103bp_to_ENST00000273905, NM_197965, uc003hqd.2_5end |
EntrezGene: | SLC10A6 |
HGNC: | 30603 |
UniProt: | Q3KNW5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 3.88e-17 | 5 |
gingival epithelial cell | 4.20e-17 | 3 |
protein secreting cell | 2.61e-14 | 6 |
sebum secreting cell | 8.06e-12 | 2 |
epithelial cell of sweat gland | 8.06e-12 | 2 |
epithelial cell of skin gland | 8.06e-12 | 2 |
acinar cell of sebaceous gland | 8.06e-12 | 2 |
epidermal cell | 4.83e-10 | 9 |
glandular epithelial cell | 1.39e-09 | 9 |
bronchial epithelial cell | 4.10e-08 | 3 |
acinar cell of salivary gland | 8.00e-08 | 3 |
endo-epithelial cell | 6.89e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 4.20e-17 | 3 |
oral opening | 4.11e-14 | 22 |
orifice | 6.22e-13 | 36 |
skin gland | 8.06e-12 | 2 |
epidermis gland | 8.06e-12 | 2 |
gland of integumental system | 8.06e-12 | 2 |
sebaceous gland | 8.06e-12 | 2 |
skin sebaceous gland | 8.06e-12 | 2 |
sweat gland | 8.06e-12 | 2 |
sweat gland placode | 8.06e-12 | 2 |
sebaceous gland placode | 8.06e-12 | 2 |
adult organism | 3.98e-11 | 114 |
mouth | 2.04e-10 | 29 |
stomodeum | 2.04e-10 | 29 |
lower respiratory tract epithelium | 4.10e-08 | 3 |
epithelium of bronchus | 4.10e-08 | 3 |
tongue | 6.72e-08 | 3 |
gustatory system | 6.72e-08 | 3 |
future tongue | 6.72e-08 | 3 |
respiratory system | 8.42e-08 | 74 |
surface structure | 1.11e-07 | 99 |
vagina | 4.85e-07 | 1 |
substantia nigra | 8.03e-07 | 1 |
midbrain nucleus | 8.03e-07 | 1 |
regional part of midbrain | 8.03e-07 | 1 |
midbrain | 8.03e-07 | 1 |
presumptive midbrain | 8.03e-07 | 1 |
midbrain neural tube | 8.03e-07 | 1 |