FFCP PHASE1:Hg19::chrX:118925585..118925599,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6170 | |EntrezGene=6170 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10350 | |HGNC=10350 | ||
|TSSclassifier=strong | |||
|UniProt=P62891 | |UniProt=P62891 | ||
|association_with_transcript=6bp_to_ENST00000361575,NM_001000,uc004erx.1_5end | |association_with_transcript=6bp_to_ENST00000361575,NM_001000,uc004erx.1_5end | ||
|cluster_id=chrX:118925585..118925599,- | |||
|coexpression_cluster_id=C4624 | |||
|description=CAGE_peak_1_at_RPL39_5end | |description=CAGE_peak_1_at_RPL39_5end | ||
|id=chrX:118925585..118925599,- | |id=chrX:118925585..118925599,- | ||
|ontology_enrichment_celltype=CL:0000838!1.33e-18!52;CL:0000542!1.49e-18!53;CL:0000051!1.49e-18!53;CL:0002087!3.55e-16!119;CL:0002031!3.67e-14!124;CL:0000738!1.13e-13!140;CL:0000037!3.15e-12!172;CL:0000566!3.15e-12!172;CL:0000988!3.54e-11!182;CL:0002032!5.46e-11!165;CL:0000837!5.46e-11!165;CL:0000791!7.73e-10!18;CL:0000789!7.73e-10!18;CL:0002420!7.73e-10!18;CL:0002419!7.73e-10!18;CL:0000790!7.73e-10!18;CL:0000084!1.10e-09!25;CL:0000827!1.10e-09!25;CL:0000945!1.60e-09!24;CL:0000826!1.60e-09!24;CL:0000236!5.51e-08!14;CL:0000003!2.45e-07!722;CL:0000860!4.47e-07!45;CL:0000625!5.08e-07!11 | |ontology_enrichment_celltype=CL:0000838!1.33e-18!52;CL:0000542!1.49e-18!53;CL:0000051!1.49e-18!53;CL:0002087!3.55e-16!119;CL:0002031!3.67e-14!124;CL:0000738!1.13e-13!140;CL:0000037!3.15e-12!172;CL:0000566!3.15e-12!172;CL:0000988!3.54e-11!182;CL:0002032!5.46e-11!165;CL:0000837!5.46e-11!165;CL:0000791!7.73e-10!18;CL:0000789!7.73e-10!18;CL:0002420!7.73e-10!18;CL:0002419!7.73e-10!18;CL:0000790!7.73e-10!18;CL:0000084!1.10e-09!25;CL:0000827!1.10e-09!25;CL:0000945!1.60e-09!24;CL:0000826!1.60e-09!24;CL:0000236!5.51e-08!14;CL:0000003!2.45e-07!722;CL:0000860!4.47e-07!45;CL:0000625!5.08e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000542;2.04e-11;53!CL:0000791;7.81e-10;18!CL:0000789;7.81e-10;18!CL:0002419;7.81e-10;18!CL:0000084;1.16e-09;25!CL:0000945;1.68e-09;24!CL:0000236;3.02e-08;13!CL:0000625;5.09e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.33e-18,52;CL:0000542,1.49e-18,53;CL:0000051,1.49e-18,53;CL:0002087,1.34e-15,115;CL:0002031,1.35e-13,120;CL:0000738,4.11e-13,136;CL:0000037,1.09e-11,168;CL:0000988,8.82e-11,177;CL:0002032,1.81e-10,161;CL:0000837,1.81e-10,161;CL:0000791,7.73e-10,18;CL:0000789,7.73e-10,18;CL:0002420,7.73e-10,18;CL:0002419,7.73e-10,18;CL:0000790,7.73e-10,18;CL:0000084,1.10e-09,25;CL:0000827,1.10e-09,25;CL:0000945,1.60e-09,24;CL:0000826,1.60e-09,24;CL:0000236,5.51e-08,14;CL:0000625,5.08e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000051;2.04e-11;53!CL:0000790;7.81e-10;18 | |||
|ontology_enrichment_disease=DOID:14566!1.49e-07!239;DOID:162!2.66e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,1.49e-07,239;DOID:162,2.66e-07,235 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@RPL39 | |short_description=p1@RPL39 | ||
}} | }} |
Latest revision as of 05:21, 19 September 2015
Short description: | p1@RPL39 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RPL39_5end |
Coexpression cluster: | C4624_CD34_CD4_CD8_CD133_CD19_testicular_diffuse |
Association with transcript: | 6bp_to_ENST00000361575, NM_001000, uc004erx.1_5end |
EntrezGene: | RPL39 |
HGNC: | 10350 |
UniProt: | P62891 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.33e-18 | 52 |
lymphocyte | 1.49e-18 | 53 |
common lymphoid progenitor | 1.49e-18 | 53 |
nongranular leukocyte | 1.34e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 1.35e-13 | 120 |
leukocyte | 4.11e-13 | 136 |
hematopoietic stem cell | 1.09e-11 | 168 |
hematopoietic cell | 8.82e-11 | 177 |
hematopoietic oligopotent progenitor cell | 1.81e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.81e-10 | 161 |
mature alpha-beta T cell | 7.73e-10 | 18 |
alpha-beta T cell | 7.73e-10 | 18 |
immature T cell | 7.73e-10 | 18 |
mature T cell | 7.73e-10 | 18 |
immature alpha-beta T cell | 7.73e-10 | 18 |
T cell | 1.10e-09 | 25 |
pro-T cell | 1.10e-09 | 25 |
lymphocyte of B lineage | 1.60e-09 | 24 |
pro-B cell | 1.60e-09 | 24 |
B cell | 5.51e-08 | 14 |
CD8-positive, alpha-beta T cell | 5.08e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 1.49e-07 | 239 |
cancer | 2.66e-07 | 235 |