FFCP PHASE1:Hg19::chr16:30198154..30198167,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:30198154..30198167,+
|short_description=p5@CORO1A
|description=CAGE_peak_5_at_CORO1A_5end
|association_with_transcript=151bp_to_uc002dwy.1_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11151 | |EntrezGene=11151 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2252 | |HGNC=2252 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZW98 | |UniProt=Q6ZW98 | ||
|association_with_transcript=151bp_to_uc002dwy.1_5end | |||
|cluster_id=chr16:30198154..30198167,+ | |||
|description=CAGE_peak_5_at_CORO1A_5end | |||
|id=chr16:30198154..30198167,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.35e-61!172;CL:0000566!2.35e-61!172;CL:0002087!2.48e-60!119;CL:0000988!9.61e-58!182;CL:0002032!4.39e-57!165;CL:0000837!4.39e-57!165;CL:0000738!8.05e-57!140;CL:0002031!1.02e-51!124;CL:0000542!2.70e-32!53;CL:0000051!2.70e-32!53;CL:0000838!2.28e-31!52;CL:0002057!3.66e-25!42;CL:0000763!9.03e-25!112;CL:0000049!9.03e-25!112;CL:0002009!4.98e-24!65;CL:0000084!6.20e-24!25;CL:0000827!6.20e-24!25;CL:0002194!1.22e-23!63;CL:0000576!1.22e-23!63;CL:0000040!1.22e-23!63;CL:0000559!1.22e-23!63;CL:0000860!9.10e-23!45;CL:0000791!2.11e-21!18;CL:0000789!2.11e-21!18;CL:0002420!2.11e-21!18;CL:0002419!2.11e-21!18;CL:0000790!2.11e-21!18;CL:0000766!4.02e-21!76;CL:0000557!6.60e-21!71;CL:0000839!5.09e-20!70;CL:0000625!1.69e-15!11;CL:0000134!2.49e-14!358;CL:0002320!1.57e-13!365;CL:0000219!1.26e-11!390;CL:0002393!6.91e-10!9;CL:0002397!6.91e-10!9;CL:0000945!2.65e-09!24;CL:0000826!2.65e-09!24;CL:0000048!5.98e-08!430;CL:0000723!1.65e-07!436;CL:0000034!6.02e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000791;7.28e-26;18!CL:0000789;7.28e-26;18!CL:0002419;7.28e-26;18!CL:0000084;3.41e-22;25!CL:0000625;1.73e-21;11!CL:0000542;3.10e-13;53!CL:0002393;2.33e-08;6!CL:0002397;2.33e-08;6!CL:0002087;4.11e-08;104!CL:0000624;5.53e-08;6!CL:0000875;7.13e-08;3!CL:0002396;7.13e-08;3!CL:0000898;1.52e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.37e-26,18;CL:0000789,2.37e-26,18;CL:0002420,2.37e-26,18;CL:0002419,2.37e-26,18;CL:0000790,2.37e-26,18;CL:0000084,1.42e-22,25;CL:0000827,1.42e-22,25;CL:0000625,6.80e-22,11;CL:0002087,1.44e-21,115;CL:0000838,2.37e-21,52;CL:0000542,6.99e-21,53;CL:0000051,6.99e-21,53;CL:0002031,1.17e-18,120;CL:0000738,2.07e-17,136;CL:0000037,2.13e-14,168;CL:0002393,2.70e-14,9;CL:0002397,2.70e-14,9;CL:0002032,6.51e-14,161;CL:0000837,6.51e-14,161;CL:0000988,2.20e-13,177;CL:0000624,4.19e-08,6;CL:0000875,7.28e-08,3;CL:0002396,7.28e-08,3;CL:0000898,8.93e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000790;7.28e-26;18!CL:0000051;3.10e-13;53 | |||
|ontology_enrichment_disease=DOID:2531!7.10e-14!51;DOID:0060083!7.10e-14!51;DOID:1240!6.75e-10!39;DOID:8692!2.67e-07!31;DOID:0060058!6.86e-07!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.19e-26!102;UBERON:0003061!2.19e-26!102;UBERON:0002193!2.17e-23!112;UBERON:0002371!3.87e-17!80;UBERON:0001474!4.33e-15!86;UBERON:0002405!4.11e-14!115;UBERON:0002384!1.90e-12!375;UBERON:0004765!8.20e-12!101;UBERON:0001434!8.20e-12!101;UBERON:0004177!2.47e-08!7 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764134057479513,0.656804715599566,0.787107813136792,0.786728553697808,0,0.464448369948228,0.919421224478927,0,0,0.154934401160603,0,0,0,0.401088894940283,0.434021741431704,0,0.32389366601898,0,0.872389432677388,0.377875943688809,0.242584061187816,0.464858073811369,0,0,0.575384784644301,0.512321413058201,0.47296445977717,0.689491361473237,0,0,0.564727018627814,0.818718450173537,0,0.306083892370903,0.320929027076094,0,0.659702600373432,0.398927315243264,0,1.16083695451434,0.56738522469114,0,0.502497330513487,0,0.217188844705117,1.21079900526674,0.368277635987565,0.949387162322653,2.95757400836718,2.76385589954557,1.25795187305026,0.786300418025466,1.05123824989054,0.16072558669708,0.285012743741249,3.18266683518544,1.27864907635244,0,0,0,1.28019066769952,2.80277190925209,1.14950487990897,0,0,1.1384259382189,0,0.382273228125229,0,0,0,0,1.17903228824749,0.822405995998037,1.17030546773475,0.651844533267181,1.4203434172042,1.94826728407911,1.78256731016278,1.47302953737419,2.43687284041983,0.541607727530031,2.81800903396485,1.95089021339817,2.13769275984779,2.48715016007264,0.289803085735052,1.03800594213442,0,0,1.13309342697566,1.91610246800961,1.03088233644789,0.253019692019503,1.59282707162048,0.651083453856419,3.8018081777935,1.6563263098555,1.27986611154418,1.24930726552346,1.65744076430812,1.64225599384209,0.403213486449465,0.802320587350522,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348259474598534,0.26591592103773,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0.672510863961164,0,0.431255149719035,0.256686072559497,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0.413536052245775,1.07857100409308,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,4.5571774973933,0,0.411362273086194,0,0,3.17250070517708,0,0,0,0.371606350251437,0,0,0.797131363644112,0.59873811429845,1.34053759092657,0.211673582723883,0.324621940274555,0.280797178113459,0.228234679033192,0.156679895773023,0,0.846458889008016,0.1605880751037,0.201799707191048,0,0.687010689511529,0.614481528616916,0,0.166849141711909,0.390776190804081,0,0,0.540911356951966,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0.828851746593443,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.10966490978682,0.31396051279005,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0.593042257361244,0,0,0,0,0.234264445725339,0.91227394607833,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0.395223263795889,0.365377795142688,0,0,0,0,0,0,0,0.122026264901963,0.250381861413,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0.59996218756479,0.533458648470704,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.322289439867886,0.299823467774787,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0,0.829169439458779,0,0,0,0.710478008196067,0.124149428591716,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.805095174364105,1.60284246151616 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764134057479513,0.656804715599566,0.787107813136792,0.786728553697808,0,0.464448369948228,0.919421224478927,0,0,0.154934401160603,0,0,0,0.401088894940283,0.434021741431704,0,0.32389366601898,0,0.872389432677388,0.377875943688809,0.242584061187816,0.464858073811369,0,0,0.575384784644301,0.512321413058201,0.47296445977717,0.689491361473237,0,0,0.564727018627814,0.818718450173537,0,0.306083892370903,0.320929027076094,0,0.659702600373432,0.398927315243264,0,1.16083695451434,0.56738522469114,0,0.502497330513487,0,0.217188844705117,1.21079900526674,0.368277635987565,0.949387162322653,2.95757400836718,2.76385589954557,1.25795187305026,0.786300418025466,1.05123824989054,0.16072558669708,0.285012743741249,3.18266683518544,1.27864907635244,0,0,0,1.28019066769952,2.80277190925209,1.14950487990897,0,0,1.1384259382189,0,0.382273228125229,0,0,0,0,1.17903228824749,0.822405995998037,1.17030546773475,0.651844533267181,1.4203434172042,1.94826728407911,1.78256731016278,1.47302953737419,2.43687284041983,0.541607727530031,2.81800903396485,1.95089021339817,2.13769275984779,2.48715016007264,0.289803085735052,1.03800594213442,0,0,1.13309342697566,1.91610246800961,1.03088233644789,0.253019692019503,1.59282707162048,0.651083453856419,3.8018081777935,1.6563263098555,1.27986611154418,1.24930726552346,1.65744076430812,1.64225599384209,0.403213486449465,0.802320587350522,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348259474598534,0.26591592103773,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0.672510863961164,0,0.431255149719035,0.256686072559497,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0.413536052245775,1.07857100409308,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,4.5571774973933,0,0.411362273086194,0,0,3.17250070517708,0,0,0,0.371606350251437,0,0,0.797131363644112,0.59873811429845,1.34053759092657,0.211673582723883,0.324621940274555,0.280797178113459,0.228234679033192,0.156679895773023,0,0.846458889008016,0.1605880751037,0.201799707191048,0,0.687010689511529,0.614481528616916,0,0.166849141711909,0.390776190804081,0,0,0.540911356951966,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0.828851746593443,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.10966490978682,0.31396051279005,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0.593042257361244,0,0,0,0,0.234264445725339,0.91227394607833,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0.395223263795889,0.365377795142688,0,0,0,0,0,0,0,0.122026264901963,0.250381861413,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0.59996218756479,0.533458648470704,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.322289439867886,0.299823467774787,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0,0.829169439458779,0,0,0,0.710478008196067,0.124149428591716,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.805095174364105,1.60284246151616 | ||
|short_description=p5@CORO1A | |||
}} | }} |
Latest revision as of 07:06, 16 September 2015
Short description: | p5@CORO1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CORO1A_5end |
Coexpression cluster: | NA |
Association with transcript: | 151bp_to_uc002dwy.1_5end |
EntrezGene: | CORO1A |
HGNC: | 2252 |
UniProt: | Q6ZW98 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.37e-26 | 18 |
alpha-beta T cell | 2.37e-26 | 18 |
immature T cell | 2.37e-26 | 18 |
mature T cell | 2.37e-26 | 18 |
immature alpha-beta T cell | 2.37e-26 | 18 |
T cell | 1.42e-22 | 25 |
pro-T cell | 1.42e-22 | 25 |
CD8-positive, alpha-beta T cell | 6.80e-22 | 11 |
nongranular leukocyte | 1.44e-21 | 115 |
lymphoid lineage restricted progenitor cell | 2.37e-21 | 52 |
lymphocyte | 6.99e-21 | 53 |
common lymphoid progenitor | 6.99e-21 | 53 |
hematopoietic lineage restricted progenitor cell | 1.17e-18 | 120 |
leukocyte | 2.07e-17 | 136 |
hematopoietic stem cell | 2.13e-14 | 168 |
intermediate monocyte | 2.70e-14 | 9 |
CD14-positive, CD16-positive monocyte | 2.70e-14 | 9 |
hematopoietic oligopotent progenitor cell | 6.51e-14 | 161 |
hematopoietic multipotent progenitor cell | 6.51e-14 | 161 |
hematopoietic cell | 2.20e-13 | 177 |
CD4-positive, alpha-beta T cell | 4.19e-08 | 6 |
non-classical monocyte | 7.28e-08 | 3 |
CD14-low, CD16-positive monocyte | 7.28e-08 | 3 |
naive T cell | 8.93e-08 | 3 |