FFCP PHASE1:Hg19::chr16:30905269..30905292,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:30905269..30905292,-
|short_description=p3@BCL7C
|description=CAGE_peak_3_at_BCL7C_5end
|association_with_transcript=106bp_to_NM_004765,uc002dzt.1,uc002dz...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9274 | |EntrezGene=9274 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1006 | |HGNC=1006 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WUZ0 | |UniProt=Q8WUZ0 | ||
|association_with_transcript=106bp_to_NM_004765,uc002dzt.1,uc002dzv.2_5end | |||
|cluster_id=chr16:30905269..30905292,- | |||
|coexpression_cluster_id=C345 | |||
|description=CAGE_peak_3_at_BCL7C_5end | |||
|id=chr16:30905269..30905292,- | |||
|ontology_enrichment_celltype=CL:0000055!5.32e-34!180;CL:0000057!7.84e-20!75;CL:0000183!7.32e-13!59;CL:0000222!1.30e-12!119;CL:0000680!1.88e-12!57;CL:0000056!1.88e-12!57;CL:0000355!1.88e-12!57;CL:0000187!4.53e-12!54;CL:0000220!1.81e-11!246;CL:0002321!4.43e-11!248;CL:0000393!7.03e-10!60;CL:0000211!7.03e-10!60;CL:0000192!4.72e-09!42;CL:0000514!4.72e-09!42;CL:0002371!4.47e-08!591;CL:0002620!1.15e-07!23;CL:0000548!4.38e-07!679;CL:0000004!4.38e-07!679;CL:0000255!4.38e-07!679;CL:0000499!7.66e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0000057;3.32e-09;73!CL:0000187;8.69e-09;55!CL:0002620;1.52e-08;23!CL:0000393;5.94e-08;61!CL:0000211;5.94e-08;61!CL:0000192;1.52e-07;43!CL:0002570;3.04e-07;8!CL:0000153;9.12e-07;9!CL:0000447;9.12e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.55e-19,76;CL:0000680,1.68e-14,58;CL:0000056,1.68e-14,58;CL:0000355,1.68e-14,58;CL:0000187,5.71e-14,55;CL:0000393,2.64e-12,61;CL:0000211,2.64e-12,61;CL:0000222,2.12e-10,121;CL:0000192,1.00e-09,43;CL:0000514,1.00e-09,43;CL:0000048,3.55e-09,427;CL:0000723,7.47e-09,433;CL:0002620,1.85e-08,23;CL:0000034,4.70e-08,441;CL:0002570,2.18e-07,8;CL:0000499,2.93e-07,28;CL:0000153,4.46e-07,9;CL:0000447,4.46e-07,9;CL:0000327,5.47e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000355;5.49e-09;58!CL:0000514;1.52e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!2.18e-18!143;UBERON:0000914!2.18e-16!83;UBERON:0002329!2.18e-16!83;UBERON:0003077!2.18e-16!83;UBERON:0003059!2.18e-16!83;UBERON:0007282!2.18e-16!83;UBERON:0009618!2.18e-16!83;UBERON:0007285!2.18e-16!83;UBERON:0002100!6.85e-15!216;UBERON:0000475!7.55e-15!365;UBERON:0004290!6.08e-14!70;UBERON:0000481!9.63e-14!347;UBERON:0003104!1.47e-13!238;UBERON:0009142!1.47e-13!238;UBERON:0000486!1.31e-12!82;UBERON:0000119!9.39e-12!312;UBERON:0000483!2.02e-11!309;UBERON:0003102!3.19e-11!95;UBERON:0003914!3.67e-11!118;UBERON:0001134!1.11e-10!61;UBERON:0002036!1.11e-10!61;UBERON:0003082!1.11e-10!61;UBERON:0002385!2.01e-10!63;UBERON:0001015!2.01e-10!63;UBERON:0000383!2.01e-10!63;UBERON:0004872!6.51e-10!84;UBERON:0000477!3.23e-09!286;UBERON:0000468!3.93e-09!659;UBERON:0000490!4.46e-09!138;UBERON:0000467!3.96e-08!625;UBERON:0000480!6.12e-08!626;UBERON:0003103!6.25e-08!69;UBERON:0002097!6.56e-08!40;UBERON:0002199!1.06e-07!45;UBERON:0002416!1.06e-07!45;UBERON:0002049!1.63e-07!79;UBERON:0007798!1.63e-07!79;UBERON:0001981!5.56e-07!60;UBERON:0007500!5.56e-07!60;UBERON:0004537!5.56e-07!60;UBERON:0006965!5.56e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;8.40e-08;41!UBERON:0003102;4.27e-07;50!UBERON:0002199;7.82e-07;46!UBERON:0002416;7.82e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,2.35e-17,78;UBERON:0002329,8.29e-17,71;UBERON:0003059,8.29e-17,71;UBERON:0007282,8.29e-17,71;UBERON:0004290,8.29e-17,71;UBERON:0009618,8.29e-17,71;UBERON:0003077,2.37e-16,72;UBERON:0007285,2.37e-16,72;UBERON:0007524,6.54e-16,73;UBERON:0000486,9.46e-15,83;UBERON:0005256,2.17e-13,122;UBERON:0001134,9.91e-13,62;UBERON:0002036,9.91e-13,62;UBERON:0003082,9.91e-13,62;UBERON:0002385,6.12e-12,64;UBERON:0001015,6.12e-12,64;UBERON:0000383,6.12e-12,64;UBERON:0003104,9.49e-12,160;UBERON:0009142,9.49e-12,160;UBERON:0000490,1.49e-10,148;UBERON:0003102,7.34e-10,99;UBERON:0002097,2.75e-09,41;UBERON:0002199,3.05e-09,46;UBERON:0002416,3.05e-09,46;UBERON:0002100,2.41e-08,199;UBERON:0000119,1.47e-07,309;UBERON:0000483,1.59e-07,306;UBERON:0000479,1.99e-07,773;UBERON:0004872,4.44e-07,83;UBERON:0003914,9.16e-07,117 | |||
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|phase1_expression=2.36181893051724,1.07050261945492,1.26858963686374,1.0007329835313,0.446961094427288,2.61701557230111,0,0,0.783556884599516,1.47440361900905,1.39560233594486,0.873765488520689,0.527533956456907,2.97039247104112,1.98838425436749,0,0,0,1.46379839637152,1.96993692922861,3.26401105990805,1.25381888591235,2.28988789704845,1.77936752594749,1.12988375635323,0.0764134057479513,0,0,0,0,0,0.919421224478927,2.10844143144775,0,0,0,0,0,0,0,0.223915474239924,0,0,0.145398238779565,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0.211255286311942,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334372990781356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,7.31420598941885,0.670700859703636,1.66221330396589,2.53007406669196,2.00535164254356,3.33146993609895,1.5905718941022,2.91980922181582,0.567208902984407,1.10864698731282,0.527008714158756,0.72038491523742,1.82147644146271,1.11235332835329,0.324547393654683,0.174129737299267,0,0,0,0,0.39752481473341,0,1.04142150482278,0.56530794192401,0,0,0.208994966536811,0,0,0,1.20848795132744,3.80136052859256,1.70843440283719,0.367663080345869,0,1.07159673940896,0.673588117878509,1.35133776579987,1.53316637465883,0,0.732806975721629,0,0,0.436094052142534,1.98788780678127,2.15271869829786,0.662045904066094,1.43418310374407,3.90135220418193,1.12135520028461,2.1349799145941,1.2333377420858,1.55605517699883,0.538842688278752,0.653847612453835,1.21085942115945,0,2.34321431833797,1.87296046098192,2.2818872861778,1.64393548606981,1.40921398372518,1.13311061057692,0.842704840213491,0.816616685019573,1.35117749042945,1.54988671763648,2.37600571456411,1.7308685049499,3.64064544775211,5.74894513452991,2.52504170931099,0.750711119231785,0.554128230968366,2.63386572528503,4.90380473278431,2.25357088359895,2.04177929688038,1.61450672119976,2.34913127700424,1.69545520927649,0.300091096084402,1.23663035086127,0.772921620136887,2.41951913231067,1.0126579934476,1.85130309806277,1.00973509697646,1.84099797284599,1.2931684545505,0.710019185033229,1.30977727695932,2.20428770003634,0.386521706326594,0,0.573609190778008,0,0.132529768321485,0,0.10366105501537,0.252320850875628,0,3.12899064659632,3.21620469096443,5.52539685409922,2.3218396401599,2.16563844500876,1.0647612003586,1.85443159085912,0.723033089650446,1.65440959098591,1.52515610864684,1.89816495288877,1.21348177344148,1.96221465125346,0.38474715694639,0.738155454624648,4.20725321410337,4.5273141246454,4.41026134156626,0,0.982827216677626,0,0,0.122988438543114,0.171567810298526,0.329250856225877,1.1240175325762,0.703702806881416,0.462942225792648,0.651616610620649,1.03993478527958,2.88662684050547,0.115930404975077,0.587043471179108,0.721832238805369,2.31492756288305,0.380508304469197,0,0.858486162094873,0,0,0.148631162288728,0.93733833986777,0.335964256397719,0.283550194484773,0.806026704325635,1.16253575405585,1.91691339582606,0,0,0.414656231081544,0.432359860250884,0.37872730027914,0.380987365753014,0.381988425558278,0,0,0.411309970813294,0.300343057843917,0,0.448524337381443,1.74384027533312,0.5867062865676,0.904902010304444,35.7656445851882,3.381211010224,0.797814349754612,1.04007436911366,2.82928111688356,1.41849132023278,2.1313774321288,1.42977993658148,1.08524321078289,0.823240336780769,1.95441710576241,0.710783897485092,0,0.602878754119172,0.871533458600294,0.499864955910285,0,0,0,0.958499421966331,0,0,1.30303176000821,2.26023954805422,0.179060963239896,0.112085143993527,0,0.215627574859517,0,0.254094624222463,0,0,0.335032530668698,1.91381625495949,0,0,0,2.4538298343828,2.50085260529839,1.08506009479894,1.03985430765404,1.24900292158013,0.946214490203608,0.937131319941706,2.40756879782175,2.27407504055985,10.3473071292505,1.32845119707087,2.94990669666725,3.12781012085098,0.587403472388222,1.37257369524342,0,0,0,0.909382714338778,1.66435439510497,0.604780586659361,1.48864684691266,0.767309866440312,1.12264037773229,0.768834895534206,0.511707249066704,1.28683136914886,2.96836132889982,1.85051632563187,3.9063579568888,1.8067974323038,2.07701771673448,2.32420756919918,0.120859449591622,0.40101294060657,0.644566922551274,1.95184561879831,1.82091168006717,3.54035920390445,0.902399225814824,0.308061348417659,3.92174884588428,2.92278449306521,0.105551628892876,0,0.340187410553031,0.647747748306418,1.54227252690289,1.08378575017541,3.01013864312912,0.509752546090077,0.831076008928724,1.34324852833307,0,0,0.512900250232778,0.328014645699706,0.976135183992909,0.824328093181778,0.457847324091717,0.330037999682352,0.574265537996172,1.30012049207304,6.42735719376638,1.25671933779759,1.54048617114644,1.38153307253517,1.7918754422989,1.50388342815583,2.32026710262766,1.70453254832202,2.31483292681517,0.826424576804891,0,0.127612712494584,0.4046311234222,2.32422774648643,0.94443704049192,4.1822236209636,2.7723022215848,1.06461206063404,0.869932992075073,2.03856641014312,1.14499909393593,1.48863347743867,0.949138274156178,0,6.65334257409468,4.7073288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| ||
|short_description=p3@BCL7C | |||
}} | }} |
Latest revision as of 09:58, 16 September 2015
Short description: | p3@BCL7C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_BCL7C_5end |
Coexpression cluster: | C345_Mesenchymal_Fibroblast_Alveolar_Renal_Pericytes_Hepatic_Smooth |
Association with transcript: | 106bp_to_NM_004765, uc002dzt.1, uc002dzv.2_5end |
EntrezGene: | BCL7C |
HGNC: | 1006 |
UniProt: | Q8WUZ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.55e-19 | 76 |
muscle precursor cell | 1.68e-14 | 58 |
myoblast | 1.68e-14 | 58 |
multi-potent skeletal muscle stem cell | 1.68e-14 | 58 |
muscle cell | 5.71e-14 | 55 |
electrically responsive cell | 2.64e-12 | 61 |
electrically active cell | 2.64e-12 | 61 |
mesodermal cell | 2.12e-10 | 121 |
smooth muscle cell | 1.00e-09 | 43 |
smooth muscle myoblast | 1.00e-09 | 43 |
multi fate stem cell | 3.55e-09 | 427 |
somatic stem cell | 7.47e-09 | 433 |
skin fibroblast | 1.85e-08 | 23 |
stem cell | 4.70e-08 | 441 |
mesenchymal stem cell of adipose | 2.18e-07 | 8 |
stromal cell | 2.93e-07 | 28 |
GAG secreting cell | 4.46e-07 | 9 |
carbohydrate secreting cell | 4.46e-07 | 9 |
extracellular matrix secreting cell | 5.47e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 2.35e-17 | 78 |
somite | 8.29e-17 | 71 |
presomitic mesoderm | 8.29e-17 | 71 |
presumptive segmental plate | 8.29e-17 | 71 |
dermomyotome | 8.29e-17 | 71 |
trunk paraxial mesoderm | 8.29e-17 | 71 |
paraxial mesoderm | 2.37e-16 | 72 |
presumptive paraxial mesoderm | 2.37e-16 | 72 |
dense mesenchyme tissue | 6.54e-16 | 73 |
multilaminar epithelium | 9.46e-15 | 83 |
trunk mesenchyme | 2.17e-13 | 122 |
skeletal muscle tissue | 9.91e-13 | 62 |
striated muscle tissue | 9.91e-13 | 62 |
myotome | 9.91e-13 | 62 |
muscle tissue | 6.12e-12 | 64 |
musculature | 6.12e-12 | 64 |
musculature of body | 6.12e-12 | 64 |
mesenchyme | 9.49e-12 | 160 |
entire embryonic mesenchyme | 9.49e-12 | 160 |
unilaminar epithelium | 1.49e-10 | 148 |
surface structure | 7.34e-10 | 99 |
skin of body | 2.75e-09 | 41 |
integument | 3.05e-09 | 46 |
integumental system | 3.05e-09 | 46 |
trunk | 2.41e-08 | 199 |
cell layer | 1.47e-07 | 309 |
epithelium | 1.59e-07 | 306 |
tissue | 1.99e-07 | 773 |
splanchnic layer of lateral plate mesoderm | 4.44e-07 | 83 |
epithelial tube | 9.16e-07 | 117 |