FFCP PHASE1:Hg19::chr7:73149424..73149445,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:73149424..73149445,+ | |||
|coexpression_cluster_id=C4108 | |||
|description=CAGE_peak_at_chr7:73149424..73149445,+ | |description=CAGE_peak_at_chr7:73149424..73149445,+ | ||
|id=chr7:73149424..73149445,+ | |id=chr7:73149424..73149445,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002537;2.09e-15;5!CL:0000349;1.32e-10;19!CL:0000313;8.67e-10;1!CL:0002559;3.34e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,2.61e-15,5;CL:0000349,1.30e-10,19;CL:0000313,8.68e-10,1;CL:0002559,2.94e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:299!4.27e-10!25 | |ontology_enrichment_disease=DOID:299!4.27e-10!25 | ||
|ontology_enrichment_disease_v019=DOID:2152;8.67e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,8.68e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0000160!6.20e-11!27;UBERON:0005631!8.02e-11!14;UBERON:0000158!8.02e-11!14;UBERON:0005409!1.97e-09!35;UBERON:0004119!3.08e-08!169;UBERON:0000925!3.08e-08!169;UBERON:0006595!3.08e-08!169;UBERON:0001007!7.39e-08!155;UBERON:0001555!7.39e-08!155;UBERON:0007026!7.39e-08!155;UBERON:0000305!2.80e-07!7;UBERON:0004921!3.78e-07!129;UBERON:0004185!3.78e-07!129;UBERON:0000995!8.81e-07!21;UBERON:0002294!8.85e-07!7;UBERON:0001173!8.85e-07!7;UBERON:0004912!8.85e-07!7 | |ontology_enrichment_uberon=UBERON:0000160!6.20e-11!27;UBERON:0005631!8.02e-11!14;UBERON:0000158!8.02e-11!14;UBERON:0005409!1.97e-09!35;UBERON:0004119!3.08e-08!169;UBERON:0000925!3.08e-08!169;UBERON:0006595!3.08e-08!169;UBERON:0001007!7.39e-08!155;UBERON:0001555!7.39e-08!155;UBERON:0007026!7.39e-08!155;UBERON:0000305!2.80e-07!7;UBERON:0004921!3.78e-07!129;UBERON:0004185!3.78e-07!129;UBERON:0000995!8.81e-07!21;UBERON:0002294!8.85e-07!7;UBERON:0001173!8.85e-07!7;UBERON:0004912!8.85e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.04e-13;10!UBERON:0000158;2.04e-13;10!UBERON:0000160;3.15e-11;17!UBERON:0000305;3.70e-11;7!UBERON:0004911;8.67e-10;1!UBERON:0007195;3.39e-09;1!UBERON:0005409;9.57e-09;22!UBERON:0000478;2.35e-08;24!UBERON:0002108;1.50e-07;4!UBERON:0002073;3.34e-07;5!UBERON:0000059;3.46e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.83e-14,14;UBERON:0000158,1.83e-14,14;UBERON:0000160,2.74e-11,17;UBERON:0000305,4.32e-11,7;UBERON:0004911,8.68e-10,1;UBERON:0004871,9.11e-10,8;UBERON:0007195,3.83e-09,1;UBERON:0000478,2.32e-08,24;UBERON:0005409,9.41e-08,25;UBERON:0002108,1.50e-07,4;UBERON:0002073,2.94e-07,5;UBERON:0005086,2.94e-07,5;UBERON:0000059,3.02e-07,11 | |||
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| ||
|short_description=p@chr7:73149424..73149445,+ | |short_description=p@chr7:73149424..73149445,+ | ||
}} | }} |
Latest revision as of 11:29, 31 July 2015
Short description: | p@chr7:73149424..73149445, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:73149424..73149445, + |
Coexpression cluster: | C4108_amniotic_serous_small_chorionic_colon_adenocarcinoma_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 2.61e-15 | 5 |
extraembryonic cell | 1.30e-10 | 19 |
serous secreting cell | 8.68e-10 | 1 |
hair follicle cell | 2.94e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.83e-14 | 14 |
membranous layer | 1.83e-14 | 14 |
intestine | 2.74e-11 | 17 |
amnion | 4.32e-11 | 7 |
epithelium of female gonad | 8.68e-10 | 1 |
somatic layer of lateral plate mesoderm | 9.11e-10 | 8 |
stroma of bone marrow | 3.83e-09 | 1 |
extraembryonic structure | 2.32e-08 | 24 |
gastrointestinal system | 9.41e-08 | 25 |
small intestine | 1.50e-07 | 4 |
hair follicle | 2.94e-07 | 5 |
hair follicle placode | 2.94e-07 | 5 |
large intestine | 3.02e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 8.68e-10 | 1 |