FFCP PHASE1:Hg19::chr7:80373052..80373071,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10512 | |EntrezGene=10512 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=10725 | |HGNC=10725 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=448bp_to_D32000_5end | |association_with_transcript=448bp_to_D32000_5end | ||
|cluster_id=chr7:80373052..80373071,- | |||
|coexpression_cluster_id=C1439 | |||
|description=CAGE_peak_11_at_SEMA3C_5end | |description=CAGE_peak_11_at_SEMA3C_5end | ||
|id=chr7:80373052..80373071,- | |id=chr7:80373052..80373071,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000214;7.90e-12;3!CL:0000135;2.32e-11;3!CL:0000388;2.32e-11;3!CL:0002616;1.88e-09;1!CL:0000153;1.23e-08;9!CL:0000447;1.23e-08;9!CL:0000499;6.16e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000214,7.91e-12,3;CL:0000135,2.04e-11,3;CL:0000388,2.04e-11,3;CL:0002616,1.89e-09,1;CL:0000153,1.26e-08,9;CL:0000447,1.26e-08,9;CL:0000499,6.05e-07,28 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.40e-09;1 | |||
|ontology_enrichment_disease=DOID:2394!2.12e-07!14 | |ontology_enrichment_disease=DOID:2394!2.12e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:6193;5.97e-09;1!DOID:2394;6.84e-09;14!DOID:120;5.96e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,4.19e-09,1;DOID:2394,6.85e-09,14;DOID:120,5.81e-07,27 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;3.33e-14;9!UBERON:0000042;3.33e-14;9!UBERON:0006915;7.90e-12;3!UBERON:0007616;7.90e-12;3!UBERON:0002217;7.90e-12;3!UBERON:0002018;7.90e-12;3!UBERON:0007846;2.32e-11;3!UBERON:0000043;2.32e-11;3!UBERON:0007845;2.32e-11;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,7.91e-12,3;UBERON:0007616,7.91e-12,3;UBERON:0002217,7.91e-12,3;UBERON:0002018,7.91e-12,3;UBERON:0007846,2.04e-11,3;UBERON:0000043,2.04e-11,3;UBERON:0007845,2.04e-11,3;UBERON:0004457,1.13e-10,12;UBERON:0000042,1.13e-10,12 | |||
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|phase1_expression=0.726713517082227,0.428201047781966,0,1.0007329835313,0.446961094427288,3.48935409640147,0,0.631719873426831,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,2.02785126545153,0,0,0.189069634328136,0.665188192387692,0.43917392846563,0,0,0,0.324547393654683,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0078563452417,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0.234321431833797,0,0,0.597794722207204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0.226864366320042,0,1.06778694409284,0.211931901159562,0.300091096084402,0,0.515281080091258,0,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0.161646056818812,0.710019185033229,0.201504196455281,0,0.193260853163297,0,0,0,0,0,0.10366105501537,0,0,0,1.28648187638577,0,0,0,0.118306800039844,0.168584690078102,0.482022059766964,0,0,0.237270619111097,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0.686271241194102,0,0,0.603173834469785,0.0925884451585296,0,0,0,0,0.352226082707465,0,0,0,0,0.858486162094873,0,0,0,0,0.671928512795438,0.567100388969546,0.358234090811393,0.290633938513962,0.766765358330422,0,0,0,0,0,0.317489471460845,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0.285955987316295,0,0,0,0,0.791951872933429,0,0,0.299918973546171,0,0,0,0,0,0,1.44781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0.502548796003046,0.637938751653163,0,0,0,0,0,0,0,0.178428988797162,0.315404830067869,0.234282829985426,0,0,0,0,0.184369168541703,0.260650843404249,0.195801157462741,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,1.12264037773229,0.128139149255701,0,1.44768529029247,0,0.154209693802656,0.710246901252508,0.0821271560138091,0,0.232420756919918,0,1.00253235151642,0,0.229628896329213,0.364182336013434,0,0,0.0770153371044148,0,0,0.422206515571503,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0.512900250232778,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0.107420244868274,0.290033387828457,0.170453254832202,0,0.495854746082934,0.384380134730212,0,0.30347334256665,0,1.25924938732256,0,0,0,0,0,0,0,0.316379424718726,0.571890581771475,0,0.42793898803392,0,0,0.179872457583315,0.54907405947211,0.117812402345686,0,0,0,0,0.974853958525138,0,0,0,0,0,0,0.876901770507525,0,0,0.202910376962704,0.6196469961995,0.281695602532241,0,0.0982490410131212,0,0,9.71095122369255,8.89096210991735,0,0,0.0962221127255121,0,0,0,0.86101074534246,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0.23874448473769,0.890894042497916,0.307160702099232,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0,0,0.472775363535873,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0.158936578980379,2.74297483886435,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0.277349346026277,0.347119476670262,0,0,0,1.37588825977293,0,0.0730893170861856,0,0,0.0882561266915003,0.677942222341597,0,0,0.0633107959558787,0,0,0,0.39961921916426,0,0.114536596165916,0,0.14405479798815,0,0,0.67952103036807,0.313808538937,0.203996435272644,0,0,0,0,0.429765441419957,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0.326587360109409,0,0,0.340776043570843,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0.151649117541648,0,0,0,0,0.447764408660622,0,0,0.378806010550178,0.50313580350515,0.889811221596536,0,0.151230923763239,0.15543720058278,0.591420599958536,0.955780602982214,0,0.621051827505038,0.414706207840855,1.59505028734797,1.04349012362347,0.751288044986092,1.14241563650639,0,1.27294061441792,0.751873899297419,0,0.796191777397232,0.400027764663154,0,1.34699795506368,0,0,0.428883182749851,0,0.453411851024545,0.463044948647668,0.734210113519403,0.71635536432595,0.617602894321944,0.219284049578707,0.353378291891762,0.38582807654183,0.337884881306145,0,0,0.303859956177382,0,0,0,0,0.655219697692825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0.295712172434091,0,0,0,0,0.546974809018219,0,0.992422356778588,0,1.14986184875636,0,0,0,0,0,0,0.342976018874837,0,0,0.590969204419841,0,0.078493092850514,0,0,0,0.647782773655864,0,0,0,0.116241425368125,0,0,0.207216164163037,0.3414369541879,1.38251932362818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.951360726220549,0,0,0,0,0.437119121007915,0,0.245148321753905,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0.286679166302903,0,0,0,1.0580536810308,2.231970109000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| ||
|short_description=p11@SEMA3C | |short_description=p11@SEMA3C | ||
}} | }} |
Latest revision as of 17:16, 19 September 2015
Short description: | p11@SEMA3C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SEMA3C_5end |
Coexpression cluster: | C1439_Synoviocyte_Fibroblast_heart_mesenchymal_Chondrocyte_Hep2_Myoblast |
Association with transcript: | 448bp_to_D32000_5end |
EntrezGene: | SEMA3C |
HGNC: | 10725 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 7.91e-12 | 3 |
fibrocyte | 2.04e-11 | 3 |
tendon cell | 2.04e-11 | 3 |
perirenal adipocyte cell | 1.89e-09 | 1 |
GAG secreting cell | 1.26e-08 | 9 |
carbohydrate secreting cell | 1.26e-08 | 9 |
stromal cell | 6.05e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 7.91e-12 | 3 |
layer of synovial tissue | 7.91e-12 | 3 |
synovial joint | 7.91e-12 | 3 |
synovial membrane of synovial joint | 7.91e-12 | 3 |
dense regular connective tissue | 2.04e-11 | 3 |
tendon | 2.04e-11 | 3 |
regular connective tissue | 2.04e-11 | 3 |
cavity lining | 1.13e-10 | 12 |
serous membrane | 1.13e-10 | 12 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 4.19e-09 | 1 |
ovarian cancer | 6.85e-09 | 14 |
female reproductive organ cancer | 5.81e-07 | 27 |