FFCP PHASE1:Hg19::chr7:80387698..80387712,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:80387698..80387712,- | |||
|coexpression_cluster_id=C1283 | |||
|description=CAGE_peak_at_chr7:80387698..80387712,- | |description=CAGE_peak_at_chr7:80387698..80387712,- | ||
|id=chr7:80387698..80387712,- | |id=chr7:80387698..80387712,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000135;3.51e-16;3!CL:0000388;3.51e-16;3!CL:0000499;6.11e-13;28!CL:0000153;3.49e-09;9!CL:0000447;3.49e-09;9!CL:0000214;6.83e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,2.69e-16,3;CL:0000388,2.69e-16,3;CL:0000499,3.59e-13,28;CL:0000153,2.84e-09,9;CL:0000447,2.84e-09,9;CL:0000214,6.53e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.34e-09!14;DOID:120!5.85e-07!27;DOID:193!6.08e-07!29 | |ontology_enrichment_disease=DOID:2394!1.34e-09!14;DOID:120!5.85e-07!27;DOID:193!6.08e-07!29 | ||
|ontology_enrichment_disease_v019=DOID:2394;8.29e-12;14!DOID:120;8.53e-08;27!DOID:193;3.40e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,9.49e-12,14;DOID:120,7.88e-08,27;DOID:193,3.16e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0001443!2.20e-07!11 | |ontology_enrichment_uberon=UBERON:0001443!2.20e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;3.51e-16;3!UBERON:0000043;3.51e-16;3!UBERON:0007845;3.51e-16;3!UBERON:0004457;5.25e-09;9!UBERON:0000042;5.25e-09;9!UBERON:0006915;6.83e-08;3!UBERON:0007616;6.83e-08;3!UBERON:0002217;6.83e-08;3!UBERON:0002018;6.83e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,2.69e-16,3;UBERON:0000043,2.69e-16,3;UBERON:0007845,2.69e-16,3;UBERON:0006915,6.53e-08,3;UBERON:0007616,6.53e-08,3;UBERON:0002217,6.53e-08,3;UBERON:0002018,6.53e-08,3 | |||
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| ||
|short_description=p@chr7:80387698..80387712,- | |short_description=p@chr7:80387698..80387712,- | ||
}} | }} |
Latest revision as of 12:00, 31 July 2015
Short description: | p@chr7:80387698..80387712, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:80387698..80387712, - |
Coexpression cluster: | C1283_Synoviocyte_tenocyte_Fibroblast_Adipocyte_Ewing_Chondrocyte_Neurons |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 2.69e-16 | 3 |
tendon cell | 2.69e-16 | 3 |
stromal cell | 3.59e-13 | 28 |
GAG secreting cell | 2.84e-09 | 9 |
carbohydrate secreting cell | 2.84e-09 | 9 |
synovial cell | 6.53e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 2.69e-16 | 3 |
tendon | 2.69e-16 | 3 |
regular connective tissue | 2.69e-16 | 3 |
stratified squamous epithelium | 6.53e-08 | 3 |
layer of synovial tissue | 6.53e-08 | 3 |
synovial joint | 6.53e-08 | 3 |
synovial membrane of synovial joint | 6.53e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.49e-12 | 14 |
female reproductive organ cancer | 7.88e-08 | 27 |
reproductive organ cancer | 3.16e-07 | 29 |