FFCP PHASE1:Hg19::chr17:16842731..16842777,+: Difference between revisions
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|id=chr17:16842731..16842777,+
|short_description=p@chr17:16842731..16842777,+
|description=CAGE_peak_at_chr17:16842731..16842777,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:16842731..16842777,+ | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_at_chr17:16842731..16842777,+ | |||
|id=chr17:16842731..16842777,+ | |||
|ontology_enrichment_celltype=CL:0000945!1.92e-45!24;CL:0000826!1.92e-45!24;CL:0000542!5.49e-22!53;CL:0000051!5.49e-22!53;CL:0000838!2.17e-19!52;CL:0000817!8.01e-18!3;CL:0000785!1.21e-12!2;CL:0000955!1.21e-12!2;CL:0000818!1.21e-12!2;CL:0000954!1.21e-12!2;CL:0000816!1.21e-12!2;CL:0000236!3.25e-10!14;CL:0002087!5.81e-08!119;CL:0000946!3.60e-07!1;CL:0000786!3.60e-07!1;CL:0000980!3.60e-07!1;CL:0000819!3.82e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.21e-50;24!CL:0000542;5.95e-13;53!CL:0002087;9.27e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.32e-50,24;CL:0000826,1.32e-50,24;CL:0000542,6.36e-28,53;CL:0000051,6.36e-28,53;CL:0000838,4.92e-23,52;CL:0002087,2.75e-12,115;CL:0000738,2.96e-10,136;CL:0002031,1.88e-09,120;CL:0002032,1.63e-08,161;CL:0000837,1.63e-08,161;CL:0000037,4.05e-08,168;CL:0000988,1.18e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000051;5.95e-13;53 | |||
|ontology_enrichment_disease=DOID:0060058!1.68e-14!10;DOID:12603!1.98e-07!1;DOID:2355!2.10e-07!1;DOID:630!2.23e-07!1;DOID:0050177!2.23e-07!1;DOID:0050427!2.23e-07!1;DOID:4960!2.67e-07!1;DOID:0070004!2.67e-07!1;DOID:0060073!3.82e-07!1;DOID:8675!3.82e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:12603;1.12e-16;1!DOID:2355;1.12e-16;1!DOID:630;1.41e-16;1!DOID:0050177;1.41e-16;1!DOID:0050427;1.41e-16;1!DOID:4960;2.25e-16;1!DOID:0070004;2.25e-16;1!DOID:74;5.28e-09;2!DOID:0060058;5.19e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,1.04e-16,1;DOID:2355,1.21e-16,1;DOID:630,1.41e-16,1;DOID:0050177,1.41e-16,1;DOID:0050427,1.41e-16,1;DOID:4960,2.25e-16,1;DOID:0070004,2.25e-16,1;DOID:74,5.49e-09,2;DOID:0060058,4.96e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0002106!9.52e-18!3;UBERON:0004854!9.52e-18!3;UBERON:0009034!9.52e-18!3;UBERON:0002095!9.52e-18!3;UBERON:0004782!9.52e-18!3;UBERON:0003281!9.52e-18!3;UBERON:0009664!9.52e-18!3;UBERON:0002296!9.52e-18!3;UBERON:0005602!9.52e-18!3;UBERON:0001179!9.52e-18!3;UBERON:0006293!9.52e-18!3;UBERON:0004177!6.83e-08!7;UBERON:0000029!3.40e-07!1;UBERON:0001736!4.57e-07!1;UBERON:0006298!4.57e-07!1;UBERON:0000945!5.86e-07!8;UBERON:0010039!5.86e-07!8;UBERON:0002372!9.73e-07!1;UBERON:0001961!9.73e-07!1;UBERON:0001744!9.73e-07!1;UBERON:0001735!9.73e-07!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr17:16842731..16842777,+ | |||
}} | }} |
Latest revision as of 14:14, 25 July 2015
Short description: | p@chr17:16842731..16842777, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:16842731..16842777, + |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.32e-50 | 24 |
pro-B cell | 1.32e-50 | 24 |
lymphocyte | 6.36e-28 | 53 |
common lymphoid progenitor | 6.36e-28 | 53 |
lymphoid lineage restricted progenitor cell | 4.92e-23 | 52 |
nongranular leukocyte | 2.75e-12 | 115 |
leukocyte | 2.96e-10 | 136 |
hematopoietic lineage restricted progenitor cell | 1.88e-09 | 120 |
hematopoietic oligopotent progenitor cell | 1.63e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.63e-08 | 161 |
hematopoietic stem cell | 4.05e-08 | 168 |
hematopoietic cell | 1.18e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 1.04e-16 | 1 |
anemia | 1.21e-16 | 1 |
genetic disease | 1.41e-16 | 1 |
monogenic disease | 1.41e-16 | 1 |
xeroderma pigmentosum | 1.41e-16 | 1 |
bone marrow cancer | 2.25e-16 | 1 |
myeloma | 2.25e-16 | 1 |
hematopoietic system disease | 5.49e-09 | 2 |
lymphoma | 4.96e-07 | 10 |