FFCP PHASE1:Hg19::chr17:1972190..1972210,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:1972190..1972210,-
|short_description=p@chr17:1972190..1972210,-
|description=CAGE_peak_at_chr17:1972190..1972210,-
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:1972190..1972210,- | |||
|description=CAGE_peak_at_chr17:1972190..1972210,- | |||
|id=chr17:1972190..1972210,- | |||
|ontology_enrichment_celltype=CL:0002139!6.47e-14!24;CL:0000222!2.62e-11!119;CL:0000115!2.60e-10!35;CL:0000071!3.85e-10!18;CL:0002546!3.85e-10!18;CL:0000055!1.37e-08!180;CL:0002334!2.23e-08!12;CL:0000187!8.90e-08!54;CL:0000220!1.31e-07!246;CL:0000183!1.79e-07!59;CL:0002321!2.03e-07!248;CL:0002078!4.52e-07!44;CL:0000680!4.88e-07!57;CL:0000056!4.88e-07!57;CL:0000355!4.88e-07!57;CL:0000192!5.03e-07!42;CL:0000514!5.03e-07!42;CL:1000413!9.00e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002583;9.21e-17;2!CL:0002582;2.09e-11;3!CL:0002592;3.78e-11;3!CL:0002334;1.12e-10;12!CL:0002601;5.51e-09;1!CL:0002595;4.99e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002583,7.90e-17,2;CL:0002582,1.66e-11,3;CL:0002592,3.25e-11,3;CL:0002334,9.49e-11,12;CL:0002601,2.82e-09,1;CL:0002595,7.63e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3347;1.88e-09;1!DOID:0060085;5.51e-09;1!DOID:3165;5.51e-09;1!DOID:0060121;5.51e-09;1!DOID:2438;5.51e-09;1!DOID:4418;5.51e-09;1!DOID:2394;6.28e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,1.89e-09,1;DOID:2394,6.57e-09,14;DOID:0060085,7.85e-09,1;DOID:3165,7.85e-09,1;DOID:0060121,7.85e-09,1;DOID:2438,7.85e-09,1;DOID:4418,7.85e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002049!7.52e-16!79;UBERON:0007798!7.52e-16!79;UBERON:0000055!1.57e-14!69;UBERON:0001981!2.75e-11!60;UBERON:0007500!2.75e-11!60;UBERON:0004537!2.75e-11!60;UBERON:0006965!2.75e-11!60;UBERON:0000487!6.49e-11!22;UBERON:0001637!2.16e-10!42;UBERON:0003509!2.16e-10!42;UBERON:0004572!2.16e-10!42;UBERON:0004535!2.34e-10!110;UBERON:0001986!3.85e-10!18;UBERON:0004638!3.85e-10!18;UBERON:0004852!3.85e-10!18;UBERON:0001009!8.98e-10!113;UBERON:0000490!2.32e-09!138;UBERON:0006914!4.42e-09!25;UBERON:0004872!4.67e-09!84;UBERON:0003914!5.18e-08!118;UBERON:0004573!3.05e-07!33;UBERON:0004571!3.05e-07!33;UBERON:0004290!3.17e-07!70;UBERON:0003915!9.00e-07!9;UBERON:0004700!9.00e-07!9;UBERON:0001917!9.00e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002119;9.05e-18;4!UBERON:0003498;3.78e-11;3!UBERON:0005985;3.78e-11;3!UBERON:0001621;3.78e-11;3!UBERON:0000992;1.33e-09;13!UBERON:0002072;3.15e-07;5!UBERON:0003834;4.99e-07;5!UBERON:0001533;4.99e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002119,8.83e-18,4;UBERON:0001621,3.25e-11,3;UBERON:0000992,1.39e-09,13;UBERON:0000055,9.35e-08,68;UBERON:0002072,2.97e-07,5;UBERON:0003498,4.56e-07,5;UBERON:0005985,4.56e-07,5;UBERON:0003834,7.63e-07,5;UBERON:0001533,7.63e-07,5 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0.631719873426831,0.522371256399677,2.21160542851358,0.697801167972428,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.283604451492204,0.221729397462564,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,0.39752481473341,0.860234595106124,0.347140501607594,0,0.419499436209906,0,0.208994966536811,0.516833518338658,0.35576626268671,1.00416183829401,0.402829317109147,4.56163263431108,0.488124115096339,0.367663080345869,0.81014194788176,0.17859945656816,0,0.112611480483322,0,0,2.01521918323448,0,0,0,0,0,0,0,0,0,0,0.49333509683432,0,0,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0.280901613404497,0,0,0,0,0,1.82032272387605,0,0,0,0,0,0,0,0.340296549480063,0.538168907066586,0,0.423863802319124,0,0,0,0,0.337552664482532,0.0974370051611986,0.504867548488229,0,0,0,0.201504196455281,0.169560592310488,0.386521706326594,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.897048674762886,0,1.10007428731425,0,0,0.845302752556,0,0,0,0,0,0.285955987316295,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0.415941723061614,0,0,0.117141414992713,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.256278298511402,0.511707249066704,0.160853921143607,0,4.78050050788232,1.42049380250502,1.47828880824856,2.59627214591811,0.929683027679674,0,0,0,0.229628896329213,0.546273504020151,0,0,0,0.784349769176855,0,0.211103257785751,0,1.53084334748864,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72279661398852,0.650060246036521,0,0.580024309752732,0.154048617114644,0,0.137836572484531,0,0,0.340906509664404,0.0890320356467374,0,0,0.255225424989168,0,0,0,0,0.616067160352178,1.06461206063404,0.869932992075073,0.18532421910392,0,0,0,0,0,0,0.318203247925937,0,0.179872457583315,0,0,1.2130948894399,0,1.68503382495592,0,0.243713489631284,1.05650146756755,0.545999645631943,0.141405431953713,0,1.10273068709225,0,0,0,0,0,0.30982349809975,0.563391205064483,0.143411352204052,0,0.7133421029625,1.77380532035299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0.355709216742071,0.159426272728822,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.852408440419239,0,0,0,0,0,0.111308705022906,0.329607748453519,0,0,0,0,0.102268682502155,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0.859930162358083,0,0,0,0.0969890164884194,0,0.225980740780532,0.959293472527256,1.19228767021794,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.209205692624666,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.979762080328227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,1.49254802886874,0,0,0,0,0,0,0,0.621748802331122,0.591420599958536,1.43367090447332,0,1.24210365501008,1.24411862352257,0.265841714557995,0,0,0,1.22061219961398,0.363697318405119,0.322231671127465,0,0.796191777397232,0,0.343395705182793,0,0,0,0,0,0.226705925512272,0,0,0,0,0.219284049578707,0.706756583783524,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,3.4517996303005,0,0,0.40341013740704,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0.354996002191696,0.340853619036631,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0.169927114687817,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0.103432995861895,0,0,0.0645889098360061,0,0.33639558774184,0.0636471582781649,0,0,0,0,0,0.332660356546013,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0.631719873426831,0.522371256399677,2.21160542851358,0.697801167972428,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.283604451492204,0.221729397462564,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,0.39752481473341,0.860234595106124,0.347140501607594,0,0.419499436209906,0,0.208994966536811,0.516833518338658,0.35576626268671,1.00416183829401,0.402829317109147,4.56163263431108,0.488124115096339,0.367663080345869,0.81014194788176,0.17859945656816,0,0.112611480483322,0,0,2.01521918323448,0,0,0,0,0,0,0,0,0,0,0.49333509683432,0,0,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0.280901613404497,0,0,0,0,0,1.82032272387605,0,0,0,0,0,0,0,0.340296549480063,0.538168907066586,0,0.423863802319124,0,0,0,0,0.337552664482532,0.0974370051611986,0.504867548488229,0,0,0,0.201504196455281,0.169560592310488,0.386521706326594,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.897048674762886,0,1.10007428731425,0,0,0.845302752556,0,0,0,0,0,0.285955987316295,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0.415941723061614,0,0,0.117141414992713,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.256278298511402,0.511707249066704,0.160853921143607,0,4.78050050788232,1.42049380250502,1.47828880824856,2.59627214591811,0.929683027679674,0,0,0,0.229628896329213,0.546273504020151,0,0,0,0.784349769176855,0,0.211103257785751,0,1.53084334748864,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72279661398852,0.650060246036521,0,0.580024309752732,0.154048617114644,0,0.137836572484531,0,0,0.340906509664404,0.0890320356467374,0,0,0.255225424989168,0,0,0,0,0.616067160352178,1.06461206063404,0.869932992075073,0.18532421910392,0,0,0,0,0,0,0.318203247925937,0,0.179872457583315,0,0,1.2130948894399,0,1.68503382495592,0,0.243713489631284,1.05650146756755,0.545999645631943,0.141405431953713,0,1.10273068709225,0,0,0,0,0,0.30982349809975,0.563391205064483,0.143411352204052,0,0.7133421029625,1.77380532035299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0.355709216742071,0.159426272728822,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.852408440419239,0,0,0,0,0,0.111308705022906,0.329607748453519,0,0,0,0,0.102268682502155,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0.859930162358083,0,0,0,0.0969890164884194,0,0.225980740780532,0.959293472527256,1.19228767021794,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.209205692624666,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.979762080328227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,1.49254802886874,0,0,0,0,0,0,0,0.621748802331122,0.591420599958536,1.43367090447332,0,1.24210365501008,1.24411862352257,0.265841714557995,0,0,0,1.22061219961398,0.363697318405119,0.322231671127465,0,0.796191777397232,0,0.343395705182793,0,0,0,0,0,0.226705925512272,0,0,0,0,0.219284049578707,0.706756583783524,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,3.4517996303005,0,0,0.40341013740704,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0.354996002191696,0.340853619036631,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0.169927114687817,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0.103432995861895,0,0,0.0645889098360061,0,0.33639558774184,0.0636471582781649,0,0,0,0,0,0.332660356546013,0,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p@chr17:1972190..1972210,- | |||
}} | }} |
Latest revision as of 14:35, 25 July 2015
Short description: | p@chr17:1972190..1972210, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:1972190..1972210, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subcutaneous preadipocyte | 7.90e-17 | 2 |
visceral preadipocyte | 1.66e-11 | 3 |
smooth muscle cell of the coronary artery | 3.25e-11 | 3 |
preadipocyte | 9.49e-11 | 12 |
uterine smooth muscle cell | 2.82e-09 | 1 |
smooth muscle cell of the subclavian artery | 7.63e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
left ovary | 8.83e-18 | 4 |
coronary artery | 3.25e-11 | 3 |
female gonad | 1.39e-09 | 13 |
vessel | 9.35e-08 | 68 |
hypodermis | 2.97e-07 | 5 |
heart blood vessel | 4.56e-07 | 5 |
coronary vessel | 4.56e-07 | 5 |
thoracic segment blood vessel | 7.63e-07 | 5 |
subclavian artery | 7.63e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 1.89e-09 | 1 |
ovarian cancer | 6.57e-09 | 14 |
organ system benign neoplasm | 7.85e-09 | 1 |
skin benign neoplasm | 7.85e-09 | 1 |
integumentary system benign neoplasm | 7.85e-09 | 1 |
dermis tumor | 7.85e-09 | 1 |
cutaneous fibrous histiocytoma | 7.85e-09 | 1 |