FFCP PHASE1:Hg19::chr16:72090088..72090102,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3240 | |EntrezGene=3240 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5141 | |HGNC=5141 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=28bp_to_uc002fbu.1,uc002fbv.3,uc002fbw.3_5end | |association_with_transcript=28bp_to_uc002fbu.1,uc002fbv.3,uc002fbw.3_5end | ||
|cluster_id=chr16:72090088..72090102,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_2_at_HP_5end | |description=CAGE_peak_2_at_HP_5end | ||
|id=chr16:72090088..72090102,+ | |id=chr16:72090088..72090102,+ | ||
|ontology_enrichment_celltype=CL:0000181!5.13e-22!12;CL:0000417!5.13e-22!12;CL:0000668!5.13e-22!12;CL:0000414!5.13e-22!12;CL:0000412!5.13e-22!12;CL:0000182!5.13e-22!12;CL:0002615!7.53e-15!3 | |ontology_enrichment_celltype=CL:0000181!5.13e-22!12;CL:0000417!5.13e-22!12;CL:0000668!5.13e-22!12;CL:0000414!5.13e-22!12;CL:0000412!5.13e-22!12;CL:0000182!5.13e-22!12;CL:0002615!7.53e-15!3 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.87e-19;12!CL:0000746;1.54e-09;3!CL:0000737;1.80e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.87e-19,12;CL:0000746,1.54e-09,3;CL:0000513,1.54e-09,3;CL:0000737,1.80e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.29e-10;11!CL:0000513;1.54e-09;3!UBERON:0009497;1.31e-08;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!9.26e-27!19;UBERON:0006925!9.26e-27!19;UBERON:0008836!9.26e-27!19;UBERON:0008835!4.93e-23!22;UBERON:0003894!4.93e-23!22;UBERON:0009854!5.24e-22!23;UBERON:0007499!3.36e-20!25;UBERON:0009497!3.36e-20!25;UBERON:0000015!3.36e-20!25;UBERON:0002423!3.36e-20!25;UBERON:0006235!3.36e-20!25;UBERON:0004161!3.36e-20!25;UBERON:0005057!2.12e-19!26;UBERON:0009856!2.12e-19!26;UBERON:0002365!3.59e-16!31;UBERON:0002330!3.59e-16!31;UBERON:0002417!6.31e-16!61;UBERON:0000916!6.31e-16!61;UBERON:0002368!3.00e-14!35;UBERON:0000949!3.33e-14!45;UBERON:0001301!1.07e-11!1;UBERON:0002363!1.81e-11!1;UBERON:0007647!1.81e-11!1;UBERON:0010115!1.81e-11!1;UBERON:0005172!2.01e-11!55;UBERON:0005173!2.01e-11!55;UBERON:0000466!2.96e-10!126;UBERON:0003929!5.35e-09!54;UBERON:0002530!3.56e-08!59;UBERON:0009569!5.89e-08!113;UBERON:0003688!7.08e-08!6;UBERON:0002358!7.08e-08!6;UBERON:0003684!7.08e-08!6;UBERON:0001178!7.08e-08!6;UBERON:0003914!1.40e-07!118;UBERON:0005177!7.50e-07!107 | |ontology_enrichment_uberon=UBERON:0002107!9.26e-27!19;UBERON:0006925!9.26e-27!19;UBERON:0008836!9.26e-27!19;UBERON:0008835!4.93e-23!22;UBERON:0003894!4.93e-23!22;UBERON:0009854!5.24e-22!23;UBERON:0007499!3.36e-20!25;UBERON:0009497!3.36e-20!25;UBERON:0000015!3.36e-20!25;UBERON:0002423!3.36e-20!25;UBERON:0006235!3.36e-20!25;UBERON:0004161!3.36e-20!25;UBERON:0005057!2.12e-19!26;UBERON:0009856!2.12e-19!26;UBERON:0002365!3.59e-16!31;UBERON:0002330!3.59e-16!31;UBERON:0002417!6.31e-16!61;UBERON:0000916!6.31e-16!61;UBERON:0002368!3.00e-14!35;UBERON:0000949!3.33e-14!45;UBERON:0001301!1.07e-11!1;UBERON:0002363!1.81e-11!1;UBERON:0007647!1.81e-11!1;UBERON:0010115!1.81e-11!1;UBERON:0005172!2.01e-11!55;UBERON:0005173!2.01e-11!55;UBERON:0000466!2.96e-10!126;UBERON:0003929!5.35e-09!54;UBERON:0002530!3.56e-08!59;UBERON:0009569!5.89e-08!113;UBERON:0003688!7.08e-08!6;UBERON:0002358!7.08e-08!6;UBERON:0003684!7.08e-08!6;UBERON:0001178!7.08e-08!6;UBERON:0003914!1.40e-07!118;UBERON:0005177!7.50e-07!107 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;6.62e-33;19!UBERON:0006925;6.62e-33;19!UBERON:0002423;4.07e-25;25!UBERON:0002365;2.82e-20;31!UBERON:0002330;2.82e-20;31!UBERON:0002368;1.52e-17;33!UBERON:0000949;9.67e-13;43!UBERON:0005172;3.26e-09;52!UBERON:0005173;3.26e-09;52!UBERON:0002417;3.63e-07;58!UBERON:0000916;3.63e-07;58!UBERON:0002530;9.29e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.62e-33,19;UBERON:0006925,6.62e-33,19;UBERON:0008836,6.62e-33,19;UBERON:0008835,1.76e-28,22;UBERON:0003894,1.76e-28,22;UBERON:0009854,2.91e-27,23;UBERON:0007499,4.07e-25,25;UBERON:0009497,4.07e-25,25;UBERON:0000015,4.07e-25,25;UBERON:0002423,4.07e-25,25;UBERON:0006235,4.07e-25,25;UBERON:0004161,4.07e-25,25;UBERON:0009856,3.63e-24,26;UBERON:0002365,2.48e-20,31;UBERON:0002330,2.48e-20,31;UBERON:0002368,4.75e-18,35;UBERON:0000949,4.14e-14,45;UBERON:0003929,8.40e-12,54;UBERON:0005172,8.40e-12,54;UBERON:0005173,8.40e-12,54;UBERON:0002530,8.02e-11,59;UBERON:0002417,1.20e-10,60;UBERON:0000916,1.20e-10,60;UBERON:0005911,7.71e-08,82;UBERON:0003914,9.58e-08,117;UBERON:0005256,1.99e-07,122;UBERON:0001041,2.13e-07,87 | |||
|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,130.557685866486,86.4887950676311,115.204031802874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75169719801128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7887322147588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0.0787831823072236,0,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,57.7415800691645,9.27548222385549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,130.557685866486,86.4887950676311,115.204031802874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75169719801128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7887322147588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0.0787831823072236,0,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,57.7415800691645,9.27548222385549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@HP | |short_description=p2@HP | ||
}} | }} |
Latest revision as of 18:43, 17 September 2015
Short description: | p2@HP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HP_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 28bp_to_uc002fbu.1, uc002fbv.3, uc002fbw.3_5end |
EntrezGene: | HP |
HGNC: | 5141 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.87e-19 | 12 |
cardiac muscle cell | 1.54e-09 | 3 |
cardiac muscle myoblast | 1.54e-09 | 3 |
striated muscle cell | 1.80e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
liver | 6.62e-33 | 19 |
digestive gland | 6.62e-33 | 19 |
liver bud | 6.62e-33 | 19 |
hepatic diverticulum | 1.76e-28 | 22 |
liver primordium | 1.76e-28 | 22 |
digestive tract diverticulum | 2.91e-27 | 23 |
epithelial sac | 4.07e-25 | 25 |
epithelium of foregut-midgut junction | 4.07e-25 | 25 |
anatomical boundary | 4.07e-25 | 25 |
hepatobiliary system | 4.07e-25 | 25 |
foregut-midgut junction | 4.07e-25 | 25 |
septum transversum | 4.07e-25 | 25 |
sac | 3.63e-24 | 26 |
exocrine gland | 2.48e-20 | 31 |
exocrine system | 2.48e-20 | 31 |
endocrine gland | 4.75e-18 | 35 |
endocrine system | 4.14e-14 | 45 |
gut epithelium | 8.40e-12 | 54 |
abdomen element | 8.40e-12 | 54 |
abdominal segment element | 8.40e-12 | 54 |
gland | 8.02e-11 | 59 |
abdominal segment of trunk | 1.20e-10 | 60 |
abdomen | 1.20e-10 | 60 |
endo-epithelium | 7.71e-08 | 82 |
epithelial tube | 9.58e-08 | 117 |
trunk mesenchyme | 1.99e-07 | 122 |
foregut | 2.13e-07 | 87 |