FFCP PHASE1:Hg19::chrX:150565253..150565267,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=203547 | |EntrezGene=203547 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22082 | |HGNC=22082 | ||
|TSSclassifier=strong | |||
|UniProt=Q3ZAQ7 | |UniProt=Q3ZAQ7 | ||
|association_with_transcript=-389bp_to_NM_001017980_5end | |association_with_transcript=-389bp_to_NM_001017980_5end | ||
|cluster_id=chrX:150565253..150565267,+ | |||
|coexpression_cluster_id=C65 | |||
|description=CAGE_peak_3_at_VMA21_5end | |description=CAGE_peak_3_at_VMA21_5end | ||
|id=chrX:150565253..150565267,+ | |id=chrX:150565253..150565267,+ | ||
|ontology_enrichment_celltype=CL:0002057!8.80e-26!42;CL:0000860!7.94e-22!45;CL:0002194!5.41e-18!63;CL:0000576!5.41e-18!63;CL:0000040!5.41e-18!63;CL:0000559!5.41e-18!63;CL:0000557!1.63e-17!71;CL:0002009!2.72e-17!65;CL:0000839!2.16e-16!70;CL:0000766!1.02e-15!76;CL:0002087!8.28e-13!119;CL:0000738!1.43e-11!140;CL:0002031!2.24e-11!124;CL:0000763!6.13e-08!112;CL:0000049!6.13e-08!112;CL:0000037!1.40e-07!172;CL:0000566!1.40e-07!172;CL:0000988!2.42e-07!182;CL:0002032!8.56e-07!165;CL:0000837!8.56e-07!165 | |ontology_enrichment_celltype=CL:0002057!8.80e-26!42;CL:0000860!7.94e-22!45;CL:0002194!5.41e-18!63;CL:0000576!5.41e-18!63;CL:0000040!5.41e-18!63;CL:0000559!5.41e-18!63;CL:0000557!1.63e-17!71;CL:0002009!2.72e-17!65;CL:0000839!2.16e-16!70;CL:0000766!1.02e-15!76;CL:0002087!8.28e-13!119;CL:0000738!1.43e-11!140;CL:0002031!2.24e-11!124;CL:0000763!6.13e-08!112;CL:0000049!6.13e-08!112;CL:0000037!1.40e-07!172;CL:0000566!1.40e-07!172;CL:0000988!2.42e-07!182;CL:0002032!8.56e-07!165;CL:0000837!8.56e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.45e-30;33!CL:0002057;2.45e-30;33!CL:0000576;2.21e-24;48!CL:0000473;6.74e-24;39!CL:0000234;6.74e-24;39!CL:0000766;2.13e-16;69!CL:0002087;3.45e-08;104!CL:0000763;1.80e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.48e-39,42;CL:0002057,3.48e-39,42;CL:0000473,1.07e-37,48;CL:0000234,1.07e-37,48;CL:0002194,4.81e-32,59;CL:0000576,4.81e-32,59;CL:0000040,4.81e-32,59;CL:0000559,4.81e-32,59;CL:0002009,2.43e-30,61;CL:0000557,6.44e-29,67;CL:0000766,8.72e-29,72;CL:0000839,1.57e-28,66;CL:0002087,1.36e-22,115;CL:0002031,2.60e-20,120;CL:0000738,8.00e-20,136;CL:0000763,5.65e-16,108;CL:0000049,5.65e-16,108;CL:0000988,8.51e-15,177;CL:0000037,9.74e-15,168;CL:0002032,4.25e-14,161;CL:0000837,4.25e-14,161;CL:0002393,2.12e-07,9;CL:0002397,2.12e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.19e-28;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.78e-16!80;UBERON:0002405!4.07e-15!115;UBERON:0002390!9.71e-15!102;UBERON:0003061!9.71e-15!102;UBERON:0001474!1.31e-14!86;UBERON:0002193!3.01e-13!112;UBERON:0004765!1.42e-11!101;UBERON:0001434!1.42e-11!101 | |ontology_enrichment_uberon=UBERON:0002371!9.78e-16!80;UBERON:0002405!4.07e-15!115;UBERON:0002390!9.71e-15!102;UBERON:0003061!9.71e-15!102;UBERON:0001474!1.31e-14!86;UBERON:0002193!3.01e-13!112;UBERON:0004765!1.42e-11!101;UBERON:0001434!1.42e-11!101 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.84e-27,76;UBERON:0002390,8.02e-24,98;UBERON:0003061,8.02e-24,98;UBERON:0001474,9.80e-24,82;UBERON:0002405,5.44e-20,93;UBERON:0004765,8.21e-20,90;UBERON:0002193,1.58e-19,108;UBERON:0001434,2.05e-17,100 | |||
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| ||
|short_description=p3@VMA21 | |short_description=p3@VMA21 | ||
}} | }} |
Latest revision as of 22:27, 19 September 2015
Short description: | p3@VMA21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_VMA21_5end |
Coexpression cluster: | C65_CD14_Eosinophils_Monocytederived_Basophils_immature_Macrophage_Neutrophils |
Association with transcript: | -389bp_to_NM_001017980_5end |
EntrezGene: | VMA21 |
HGNC: | 22082 |
UniProt: | Q3ZAQ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.48e-39 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.48e-39 | 42 |
defensive cell | 1.07e-37 | 48 |
phagocyte | 1.07e-37 | 48 |
monopoietic cell | 4.81e-32 | 59 |
monocyte | 4.81e-32 | 59 |
monoblast | 4.81e-32 | 59 |
promonocyte | 4.81e-32 | 59 |
macrophage dendritic cell progenitor | 2.43e-30 | 61 |
granulocyte monocyte progenitor cell | 6.44e-29 | 67 |
myeloid leukocyte | 8.72e-29 | 72 |
myeloid lineage restricted progenitor cell | 1.57e-28 | 66 |
nongranular leukocyte | 1.36e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 2.60e-20 | 120 |
leukocyte | 8.00e-20 | 136 |
myeloid cell | 5.65e-16 | 108 |
common myeloid progenitor | 5.65e-16 | 108 |
hematopoietic cell | 8.51e-15 | 177 |
hematopoietic stem cell | 9.74e-15 | 168 |
hematopoietic oligopotent progenitor cell | 4.25e-14 | 161 |
hematopoietic multipotent progenitor cell | 4.25e-14 | 161 |
intermediate monocyte | 2.12e-07 | 9 |
CD14-positive, CD16-positive monocyte | 2.12e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.84e-27 | 76 |
hematopoietic system | 8.02e-24 | 98 |
blood island | 8.02e-24 | 98 |
bone element | 9.80e-24 | 82 |
immune system | 5.44e-20 | 93 |
skeletal element | 8.21e-20 | 90 |
hemolymphoid system | 1.58e-19 | 108 |
skeletal system | 2.05e-17 | 100 |