FFCP PHASE1:Hg19::chr11:122051194..122051210,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-86bp_to_ENST00000533109_5end | |association_with_transcript=-86bp_to_ENST00000533109_5end | ||
|cluster_id=chr11:122051194..122051210,- | |||
|coexpression_cluster_id=C1617 | |||
|description=CAGE_peak_5_at_ENST00000533109_5end | |description=CAGE_peak_5_at_ENST00000533109_5end | ||
|id=chr11:122051194..122051210,- | |id=chr11:122051194..122051210,- | ||
|ontology_enrichment_celltype=CL:0000055!1.58e-39!180;CL:0000057!4.21e-21!75;CL:0000220!4.46e-17!246;CL:0002321!1.60e-16!248;CL:0000680!2.73e-16!57;CL:0000056!2.73e-16!57;CL:0000355!2.73e-16!57;CL:0000187!5.18e-15!54;CL:0000183!7.32e-14!59;CL:0000548!2.75e-13!679;CL:0000004!2.75e-13!679;CL:0000255!2.75e-13!679;CL:0000012!9.84e-13!682;CL:0000222!1.37e-12!119;CL:0000393!3.16e-12!60;CL:0000211!3.16e-12!60;CL:0002620!3.81e-12!23;CL:0000144!1.39e-11!625;CL:0000192!3.83e-11!42;CL:0000514!3.83e-11!42;CL:0002371!4.32e-11!591;CL:0000359!3.09e-09!32;CL:0000003!4.77e-08!722 | |ontology_enrichment_celltype=CL:0000055!1.58e-39!180;CL:0000057!4.21e-21!75;CL:0000220!4.46e-17!246;CL:0002321!1.60e-16!248;CL:0000680!2.73e-16!57;CL:0000056!2.73e-16!57;CL:0000355!2.73e-16!57;CL:0000187!5.18e-15!54;CL:0000183!7.32e-14!59;CL:0000548!2.75e-13!679;CL:0000004!2.75e-13!679;CL:0000255!2.75e-13!679;CL:0000012!9.84e-13!682;CL:0000222!1.37e-12!119;CL:0000393!3.16e-12!60;CL:0000211!3.16e-12!60;CL:0002620!3.81e-12!23;CL:0000144!1.39e-11!625;CL:0000192!3.83e-11!42;CL:0000514!3.83e-11!42;CL:0002371!4.32e-11!591;CL:0000359!3.09e-09!32;CL:0000003!4.77e-08!722 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.76e-16;23!CL:0000057;1.20e-10;73!CL:0000187;1.14e-07;55!CL:0000359;1.26e-07;32!CL:0002556;2.38e-07;6!CL:0002320;2.70e-07;188!CL:0000192;3.85e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.26e-24,76;CL:0002620,1.90e-16,23;CL:0000680,8.05e-14,58;CL:0000056,8.05e-14,58;CL:0000355,8.05e-14,58;CL:0000187,2.70e-12,55;CL:0000393,5.67e-10,61;CL:0000211,5.67e-10,61;CL:0000192,5.65e-09,43;CL:0000514,5.65e-09,43;CL:0000048,2.12e-08,427;CL:0000723,3.74e-08,433;CL:0000359,7.83e-08,32;CL:0000222,8.04e-08,121;CL:0002321,1.62e-07,250;CL:0000034,2.17e-07,441;CL:0002556,2.38e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000355;6.55e-08;58!CL:0000514;3.85e-07;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;6.13e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.97e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!7.92e-22!83;UBERON:0002329!7.92e-22!83;UBERON:0003077!7.92e-22!83;UBERON:0003059!7.92e-22!83;UBERON:0007282!7.92e-22!83;UBERON:0009618!7.92e-22!83;UBERON:0007285!7.92e-22!83;UBERON:0000475!2.50e-18!365;UBERON:0004290!1.86e-17!70;UBERON:0000486!1.28e-16!82;UBERON:0003102!1.28e-15!95;UBERON:0005256!3.60e-14!143;UBERON:0001134!8.03e-14!61;UBERON:0002036!8.03e-14!61;UBERON:0003082!8.03e-14!61;UBERON:0002385!3.15e-13!63;UBERON:0001015!3.15e-13!63;UBERON:0000383!3.15e-13!63;UBERON:0002100!2.03e-12!216;UBERON:0002097!1.01e-10!40;UBERON:0000481!6.48e-10!347;UBERON:0002199!6.68e-10!45;UBERON:0002416!6.68e-10!45;UBERON:0000119!7.67e-10!312;UBERON:0000483!1.70e-09!309;UBERON:0001637!9.00e-09!42;UBERON:0003509!9.00e-09!42;UBERON:0004572!9.00e-09!42;UBERON:0000490!1.01e-08!138;UBERON:0004573!2.87e-08!33;UBERON:0004571!2.87e-08!33;UBERON:0002049!3.37e-08!79;UBERON:0007798!3.37e-08!79;UBERON:0003104!3.51e-07!238;UBERON:0009142!3.51e-07!238;UBERON:0004872!3.57e-07!84;UBERON:0001981!8.52e-07!60;UBERON:0007500!8.52e-07!60;UBERON:0004537!8.52e-07!60;UBERON:0006965!8.52e-07!60 | |ontology_enrichment_uberon=UBERON:0000914!7.92e-22!83;UBERON:0002329!7.92e-22!83;UBERON:0003077!7.92e-22!83;UBERON:0003059!7.92e-22!83;UBERON:0007282!7.92e-22!83;UBERON:0009618!7.92e-22!83;UBERON:0007285!7.92e-22!83;UBERON:0000475!2.50e-18!365;UBERON:0004290!1.86e-17!70;UBERON:0000486!1.28e-16!82;UBERON:0003102!1.28e-15!95;UBERON:0005256!3.60e-14!143;UBERON:0001134!8.03e-14!61;UBERON:0002036!8.03e-14!61;UBERON:0003082!8.03e-14!61;UBERON:0002385!3.15e-13!63;UBERON:0001015!3.15e-13!63;UBERON:0000383!3.15e-13!63;UBERON:0002100!2.03e-12!216;UBERON:0002097!1.01e-10!40;UBERON:0000481!6.48e-10!347;UBERON:0002199!6.68e-10!45;UBERON:0002416!6.68e-10!45;UBERON:0000119!7.67e-10!312;UBERON:0000483!1.70e-09!309;UBERON:0001637!9.00e-09!42;UBERON:0003509!9.00e-09!42;UBERON:0004572!9.00e-09!42;UBERON:0000490!1.01e-08!138;UBERON:0004573!2.87e-08!33;UBERON:0004571!2.87e-08!33;UBERON:0002049!3.37e-08!79;UBERON:0007798!3.37e-08!79;UBERON:0003104!3.51e-07!238;UBERON:0009142!3.51e-07!238;UBERON:0004872!3.57e-07!84;UBERON:0001981!8.52e-07!60;UBERON:0007500!8.52e-07!60;UBERON:0004537!8.52e-07!60;UBERON:0006965!8.52e-07!60 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.06e-08;41!UBERON:0001758;2.38e-07;6!UBERON:0003672;2.38e-07;6!UBERON:0002199;2.68e-07;46!UBERON:0002416;2.68e-07;46!UBERON:0000075;2.90e-07;16!UBERON:0002067;5.57e-07;9!UBERON:0002384;1.00e-06;198 | |||
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| ||
|short_description=p5@ENST00000533109 | |short_description=p5@ENST00000533109 | ||
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Latest revision as of 19:17, 23 July 2015
Short description: | p5@ENST00000533109 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ENST00000533109_5end |
Coexpression cluster: | C1617_Fibroblast_meningioma_giant_Smooth_mesenchymal_hepatic_Olfactory |
Association with transcript: | -86bp_to_ENST00000533109_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.26e-24 | 76 |
skin fibroblast | 1.90e-16 | 23 |
muscle precursor cell | 8.05e-14 | 58 |
myoblast | 8.05e-14 | 58 |
multi-potent skeletal muscle stem cell | 8.05e-14 | 58 |
muscle cell | 2.70e-12 | 55 |
electrically responsive cell | 5.67e-10 | 61 |
electrically active cell | 5.67e-10 | 61 |
smooth muscle cell | 5.65e-09 | 43 |
smooth muscle myoblast | 5.65e-09 | 43 |
multi fate stem cell | 2.12e-08 | 427 |
somatic stem cell | 3.74e-08 | 433 |
vascular associated smooth muscle cell | 7.83e-08 | 32 |
mesodermal cell | 8.04e-08 | 121 |
embryonic cell | 1.62e-07 | 250 |
stem cell | 2.17e-07 | 441 |
fibroblast of periodontium | 2.38e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
somite | 1.54e-16 | 71 |
presomitic mesoderm | 1.54e-16 | 71 |
presumptive segmental plate | 1.54e-16 | 71 |
dermomyotome | 1.54e-16 | 71 |
trunk paraxial mesoderm | 1.54e-16 | 71 |
paraxial mesoderm | 4.34e-16 | 72 |
presumptive paraxial mesoderm | 4.34e-16 | 72 |
dense mesenchyme tissue | 1.19e-15 | 73 |
epithelial vesicle | 3.94e-15 | 78 |
multilaminar epithelium | 1.59e-13 | 83 |
surface structure | 1.64e-12 | 99 |
skeletal muscle tissue | 4.11e-12 | 62 |
striated muscle tissue | 4.11e-12 | 62 |
myotome | 4.11e-12 | 62 |
muscle tissue | 2.38e-11 | 64 |
musculature | 2.38e-11 | 64 |
musculature of body | 2.38e-11 | 64 |
skin of body | 4.50e-11 | 41 |
trunk mesenchyme | 5.52e-10 | 122 |
integument | 1.40e-09 | 46 |
integumental system | 1.40e-09 | 46 |
unilaminar epithelium | 3.24e-08 | 148 |
subdivision of skeletal system | 2.27e-07 | 16 |
periodontium | 2.38e-07 | 6 |
dentition | 2.38e-07 | 6 |
axial skeletal system | 2.74e-07 | 14 |
mesenchyme | 5.80e-07 | 160 |
entire embryonic mesenchyme | 5.80e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.97e-08 | 14 |