FFCP PHASE1:Hg19::chr13:21476875..21476899,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64328 | |EntrezGene=64328 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17796 | |HGNC=17796 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000465018_5end | |association_with_transcript=0bp_to_ENST00000465018_5end | ||
|cluster_id=chr13:21476875..21476899,- | |||
|description=CAGE_peak_1_at_XPO4_5end | |description=CAGE_peak_1_at_XPO4_5end | ||
|id=chr13:21476875..21476899,- | |id=chr13:21476875..21476899,- | ||
|ontology_enrichment_celltype=CL:0000542!1.51e-22!53;CL:0000051!1.51e-22!53;CL:0000037!2.11e-22!172;CL:0000566!2.11e-22!172;CL:0000838!4.59e-22!52;CL:0000988!2.38e-20!182;CL:0002032!1.76e-19!165;CL:0000837!1.76e-19!165;CL:0000738!6.55e-18!140;CL:0002031!1.64e-15!124;CL:0002087!2.54e-15!119;CL:0000945!3.40e-11!24;CL:0000826!3.40e-11!24;CL:0000791!1.40e-10!18;CL:0000789!1.40e-10!18;CL:0002420!1.40e-10!18;CL:0002419!1.40e-10!18;CL:0000790!1.40e-10!18;CL:0000084!2.98e-10!25;CL:0000827!2.98e-10!25;CL:0000236!9.92e-09!14;CL:0000625!2.42e-07!11 | |ontology_enrichment_celltype=CL:0000542!1.51e-22!53;CL:0000051!1.51e-22!53;CL:0000037!2.11e-22!172;CL:0000566!2.11e-22!172;CL:0000838!4.59e-22!52;CL:0000988!2.38e-20!182;CL:0002032!1.76e-19!165;CL:0000837!1.76e-19!165;CL:0000738!6.55e-18!140;CL:0002031!1.64e-15!124;CL:0002087!2.54e-15!119;CL:0000945!3.40e-11!24;CL:0000826!3.40e-11!24;CL:0000791!1.40e-10!18;CL:0000789!1.40e-10!18;CL:0002420!1.40e-10!18;CL:0002419!1.40e-10!18;CL:0000790!1.40e-10!18;CL:0000084!2.98e-10!25;CL:0000827!2.98e-10!25;CL:0000236!9.92e-09!14;CL:0000625!2.42e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000542;2.51e-13;53!CL:0000945;2.54e-11;24!CL:0000791;1.48e-10;18!CL:0000789;1.48e-10;18!CL:0002419;1.48e-10;18!CL:0000084;3.02e-10;25!CL:0000236;2.29e-08;13!CL:0000625;2.53e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.16e-23,168;CL:0000542,1.51e-22,53;CL:0000051,1.51e-22,53;CL:0000838,4.59e-22,52;CL:0000988,1.65e-21,177;CL:0002032,4.78e-20,161;CL:0000837,4.78e-20,161;CL:0000738,1.59e-18,136;CL:0002031,4.05e-16,120;CL:0002087,6.03e-16,115;CL:0000945,3.40e-11,24;CL:0000826,3.40e-11,24;CL:0000791,1.40e-10,18;CL:0000789,1.40e-10,18;CL:0002420,1.40e-10,18;CL:0002419,1.40e-10,18;CL:0000790,1.40e-10,18;CL:0000084,2.98e-10,25;CL:0000827,2.98e-10,25;CL:0000236,9.92e-09,14;CL:0000625,2.42e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000051;2.51e-13;53!CL:0000790;1.48e-10;18 | |||
|ontology_enrichment_disease=DOID:2531!4.88e-07!51;DOID:0060083!4.88e-07!51 | |ontology_enrichment_disease=DOID:2531!4.88e-07!51;DOID:0060083!4.88e-07!51 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,4.88e-07,51;DOID:0060083,4.88e-07,51 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@XPO4 | |short_description=p1@XPO4 | ||
}} | }} |
Latest revision as of 19:24, 16 September 2015
Short description: | p1@XPO4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_XPO4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000465018_5end |
EntrezGene: | XPO4 |
HGNC: | 17796 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 5.16e-23 | 168 |
lymphocyte | 1.51e-22 | 53 |
common lymphoid progenitor | 1.51e-22 | 53 |
lymphoid lineage restricted progenitor cell | 4.59e-22 | 52 |
hematopoietic cell | 1.65e-21 | 177 |
hematopoietic oligopotent progenitor cell | 4.78e-20 | 161 |
hematopoietic multipotent progenitor cell | 4.78e-20 | 161 |
leukocyte | 1.59e-18 | 136 |
hematopoietic lineage restricted progenitor cell | 4.05e-16 | 120 |
nongranular leukocyte | 6.03e-16 | 115 |
lymphocyte of B lineage | 3.40e-11 | 24 |
pro-B cell | 3.40e-11 | 24 |
mature alpha-beta T cell | 1.40e-10 | 18 |
alpha-beta T cell | 1.40e-10 | 18 |
immature T cell | 1.40e-10 | 18 |
mature T cell | 1.40e-10 | 18 |
immature alpha-beta T cell | 1.40e-10 | 18 |
T cell | 2.98e-10 | 25 |
pro-T cell | 2.98e-10 | 25 |
B cell | 9.92e-09 | 14 |
CD8-positive, alpha-beta T cell | 2.42e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 4.88e-07 | 51 |
immune system cancer | 4.88e-07 | 51 |