FFCP PHASE1:Hg19::chr13:21651405..21651425,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:21651405..21651425,+ | |||
|coexpression_cluster_id=C400 | |||
|description=CAGE_peak_at_chr13:21651405..21651425,+ | |description=CAGE_peak_at_chr13:21651405..21651425,+ | ||
|id=chr13:21651405..21651425,+ | |id=chr13:21651405..21651425,+ | ||
|ontology_enrichment_celltype=CL:0000763!4.48e-28!112;CL:0000049!4.48e-28!112;CL:0002032!3.81e-19!165;CL:0000837!3.81e-19!165;CL:0000037!3.71e-18!172;CL:0000566!3.71e-18!172;CL:0000988!7.07e-17!182;CL:0000557!3.67e-11!71;CL:0002194!8.30e-11!63;CL:0000576!8.30e-11!63;CL:0000040!8.30e-11!63;CL:0000559!8.30e-11!63;CL:0002009!2.07e-10!65;CL:0000990!2.28e-10!8;CL:0000766!2.82e-10!76;CL:0000839!1.61e-09!70;CL:0000840!3.37e-09!5;CL:0001029!3.37e-09!5;CL:0000451!1.65e-08!10 | |ontology_enrichment_celltype=CL:0000763!4.48e-28!112;CL:0000049!4.48e-28!112;CL:0002032!3.81e-19!165;CL:0000837!3.81e-19!165;CL:0000037!3.71e-18!172;CL:0000566!3.71e-18!172;CL:0000988!7.07e-17!182;CL:0000557!3.67e-11!71;CL:0002194!8.30e-11!63;CL:0000576!8.30e-11!63;CL:0000040!8.30e-11!63;CL:0000559!8.30e-11!63;CL:0002009!2.07e-10!65;CL:0000990!2.28e-10!8;CL:0000766!2.82e-10!76;CL:0000839!1.61e-09!70;CL:0000840!3.37e-09!5;CL:0001029!3.37e-09!5;CL:0000451!1.65e-08!10 | ||
|ontology_enrichment_celltype_v019=CL:0002032;5.13e-23;1!CL:0000557;5.13e-23;1!CL:0000771;2.59e-12;2!CL:0000763;1.90e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,3.81e-16,108;CL:0000049,3.81e-16,108;CL:0000771,2.59e-12,2;CL:0002032,8.68e-11,161;CL:0000837,8.68e-11,161;CL:0000037,2.50e-10,168;CL:0000988,8.62e-10,177 | |||
|ontology_enrichment_development_v019=CL:0000049;3.65e-10;108 | |||
|ontology_enrichment_disease=DOID:8692!3.70e-18!31;DOID:1240!4.66e-14!39;DOID:2531!2.54e-10!51;DOID:0060083!2.54e-10!51 | |ontology_enrichment_disease=DOID:8692!3.70e-18!31;DOID:1240!4.66e-14!39;DOID:2531!2.54e-10!51;DOID:0060083!2.54e-10!51 | ||
|ontology_enrichment_disease_v019=DOID:8692;7.62e-35;31!DOID:1240;6.52e-24;39!DOID:2531;8.25e-14;51!DOID:0060083;8.25e-14;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.31e-34,31;DOID:1240,1.58e-27,39;DOID:2531,4.64e-21,51;DOID:0060083,4.64e-21,51;DOID:0050686,1.07e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.12e-09!102;UBERON:0003061!1.12e-09!102;UBERON:0002371!1.22e-09!80;UBERON:0001474!8.34e-09!86;UBERON:0002193!1.47e-08!112;UBERON:0004765!3.77e-07!101;UBERON:0001434!3.77e-07!101;UBERON:0001154!3.85e-07!1;UBERON:0001153!3.85e-07!1;UBERON:0002405!4.74e-07!115 | |ontology_enrichment_uberon=UBERON:0002390!1.12e-09!102;UBERON:0003061!1.12e-09!102;UBERON:0002371!1.22e-09!80;UBERON:0001474!8.34e-09!86;UBERON:0002193!1.47e-08!112;UBERON:0004765!3.77e-07!101;UBERON:0001434!3.77e-07!101;UBERON:0001154!3.85e-07!1;UBERON:0001153!3.85e-07!1;UBERON:0002405!4.74e-07!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr13:21651405..21651425,+ | |short_description=p@chr13:21651405..21651425,+ | ||
}} | }} |
Latest revision as of 15:02, 24 July 2015
Short description: | p@chr13:21651405..21651425, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:21651405..21651425, + |
Coexpression cluster: | C400_acute_leukemia_chronic_myelodysplastic_NK_pancreas_duodenum |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 3.81e-16 | 108 |
common myeloid progenitor | 3.81e-16 | 108 |
eosinophil | 2.59e-12 | 2 |
hematopoietic oligopotent progenitor cell | 8.68e-11 | 161 |
hematopoietic multipotent progenitor cell | 8.68e-11 | 161 |
hematopoietic stem cell | 2.50e-10 | 168 |
hematopoietic cell | 8.62e-10 | 177 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.31e-34 | 31 |
leukemia | 1.58e-27 | 39 |
hematologic cancer | 4.64e-21 | 51 |
immune system cancer | 4.64e-21 | 51 |
organ system cancer | 1.07e-07 | 137 |