FFCP PHASE1:Hg19::chr15:56209278..56209284,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4734 | |EntrezGene=4734 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7727 | |HGNC=7727 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=21bp_to_ENST00000506154_5end | |association_with_transcript=21bp_to_ENST00000506154_5end | ||
|cluster_id=chr15:56209278..56209284,- | |||
|description=CAGE_peak_6_at_NEDD4_5end | |description=CAGE_peak_6_at_NEDD4_5end | ||
|id=chr15:56209278..56209284,- | |id=chr15:56209278..56209284,- | ||
|ontology_enrichment_celltype=CL:0000055!1.30e-14!180;CL:0000057!1.07e-13!75;CL:0002620!1.79e-13!23 | |ontology_enrichment_celltype=CL:0000055!1.30e-14!180;CL:0000057!1.07e-13!75;CL:0002620!1.79e-13!23 | ||
|ontology_enrichment_celltype_v019=CL:0002556;1.74e-14;6!CL:1001319;2.50e-10;1!CL:1000600;2.50e-10;1!CL:0002620;1.01e-09;23!CL:0002551;6.67e-07;6!CL:0000057;9.53e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0002556,1.59e-14,6;CL:1001319,3.61e-10,1;CL:1000600,3.61e-10,1;CL:0002620,9.86e-10,23;CL:0000057,1.75e-08,76;CL:0002551,6.48e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:6193;1.03e-10;1!DOID:17;4.06e-08;5!DOID:450;4.06e-08;5!DOID:66;4.06e-08;5!DOID:423;4.06e-08;5!DOID:0080000;4.06e-08;5!DOID:11722;4.06e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,8.95e-11,1;DOID:17,3.78e-08,5;DOID:450,3.78e-08,5;DOID:66,3.78e-08,5;DOID:423,3.78e-08,5;DOID:0080000,3.78e-08,5;DOID:11722,3.78e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!1.72e-13!95;UBERON:0000475!1.01e-11!365;UBERON:0000165!3.55e-08!28;UBERON:0000930!3.55e-08!28;UBERON:0000153!9.66e-08!129;UBERON:0007811!9.66e-08!129;UBERON:0000033!1.83e-07!123;UBERON:0002199!2.90e-07!45;UBERON:0002416!2.90e-07!45;UBERON:0002097!4.41e-07!40 | |ontology_enrichment_uberon=UBERON:0003102!1.72e-13!95;UBERON:0000475!1.01e-11!365;UBERON:0000165!3.55e-08!28;UBERON:0000930!3.55e-08!28;UBERON:0000153!9.66e-08!129;UBERON:0007811!9.66e-08!129;UBERON:0000033!1.83e-07!123;UBERON:0002199!2.90e-07!45;UBERON:0002416!2.90e-07!45;UBERON:0002097!4.41e-07!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0001758;1.74e-14;6!UBERON:0003672;1.74e-14;6!UBERON:0003129;1.69e-12;7!UBERON:0000165;2.29e-11;28!UBERON:0004645;2.50e-10;1!UBERON:0001256;2.50e-10;1!UBERON:0001259;2.50e-10;1!UBERON:0011137;3.89e-08;11!UBERON:0010323;3.89e-08;11!UBERON:0007811;4.02e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001758,1.59e-14,6;UBERON:0003672,1.59e-14,6;UBERON:0003102,2.43e-13,99;UBERON:0003129,1.57e-12,7;UBERON:0000165,6.03e-11,29;UBERON:0000930,6.03e-11,29;UBERON:0004645,3.61e-10,1;UBERON:0001256,3.61e-10,1;UBERON:0001259,3.61e-10,1;UBERON:0010323,3.71e-08,11 | |||
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| ||
|short_description=p6@NEDD4 | |short_description=p6@NEDD4 | ||
}} | }} |
Latest revision as of 04:57, 18 September 2015
Short description: | p6@NEDD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_NEDD4_5end |
Coexpression cluster: | NA |
Association with transcript: | 21bp_to_ENST00000506154_5end |
EntrezGene: | NEDD4 |
HGNC: | 7727 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of periodontium | 1.59e-14 | 6 |
bladder cell | 3.61e-10 | 1 |
lower urinary tract cell | 3.61e-10 | 1 |
skin fibroblast | 9.86e-10 | 23 |
fibroblast | 1.75e-08 | 76 |
fibroblast of dermis | 6.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
periodontium | 1.59e-14 | 6 |
dentition | 1.59e-14 | 6 |
surface structure | 2.43e-13 | 99 |
skull | 1.57e-12 | 7 |
mouth | 6.03e-11 | 29 |
stomodeum | 6.03e-11 | 29 |
urinary bladder urothelium | 3.61e-10 | 1 |
wall of urinary bladder | 3.61e-10 | 1 |
mucosa of urinary bladder | 3.61e-10 | 1 |
cranial skeletal system | 3.71e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 8.95e-11 | 1 |
musculoskeletal system disease | 3.78e-08 | 5 |
myotonic disease | 3.78e-08 | 5 |
muscle tissue disease | 3.78e-08 | 5 |
myopathy | 3.78e-08 | 5 |
muscular disease | 3.78e-08 | 5 |
myotonic dystrophy | 3.78e-08 | 5 |