FFCP PHASE1:Hg19::chr1:12679045..12679065,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:12679045..12679065,- | |||
|coexpression_cluster_id=C3854 | |||
|description=CAGE_peak_at_chr1:12679045..12679065,- | |description=CAGE_peak_at_chr1:12679045..12679065,- | ||
|id=chr1:12679045..12679065,- | |id=chr1:12679045..12679065,- | ||
|ontology_enrichment_celltype=CL:0000222!3.15e-12!119;CL:0000359!9.96e-11!32;CL:0000183!9.40e-10!59;CL:0000187!1.43e-09!54;CL:0000680!1.33e-08!57;CL:0000056!1.33e-08!57;CL:0000355!1.33e-08!57;CL:0000192!2.66e-08!42;CL:0000514!2.66e-08!42;CL:0000393!5.12e-08!60;CL:0000211!5.12e-08!60;CL:0000055!5.64e-08!180;CL:0000220!7.55e-08!246;CL:0002321!1.12e-07!248 | |ontology_enrichment_celltype=CL:0000222!3.15e-12!119;CL:0000359!9.96e-11!32;CL:0000183!9.40e-10!59;CL:0000187!1.43e-09!54;CL:0000680!1.33e-08!57;CL:0000056!1.33e-08!57;CL:0000355!1.33e-08!57;CL:0000192!2.66e-08!42;CL:0000514!2.66e-08!42;CL:0000393!5.12e-08!60;CL:0000211!5.12e-08!60;CL:0000055!5.64e-08!180;CL:0000220!7.55e-08!246;CL:0002321!1.12e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.62e-16;32!CL:0000192;3.94e-09;43!CL:0002595;1.01e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.32e-17,32;CL:0000222,1.91e-14,121;CL:0000192,3.15e-12,43;CL:0000514,3.15e-12,43;CL:0000187,2.45e-11,55;CL:0000680,2.33e-10,58;CL:0000056,2.33e-10,58;CL:0000355,2.33e-10,58;CL:0000393,1.74e-09,61;CL:0000211,1.74e-09,61;CL:0002321,8.34e-09,250;CL:0002595,9.60e-09,5 | |||
|ontology_enrichment_development_v019=CL:0000514;3.94e-09;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004573;3.16e-13;33!UBERON:0004571;3.16e-13;33!UBERON:0007625;3.47e-12;11!UBERON:0001637;2.27e-11;42!UBERON:0003509;2.27e-11;42!UBERON:0004572;2.27e-11;42!UBERON:0003834;1.01e-08;5!UBERON:0001533;1.01e-08;5!UBERON:0002049;2.18e-08;75!UBERON:0007798;2.18e-08;75!UBERON:0003914;7.56e-08;74!UBERON:0000055;8.20e-08;65!UBERON:0007500;1.68e-07;56!UBERON:0001981;1.68e-07;56!UBERON:0004537;1.68e-07;56 | |||
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| ||
|short_description=p@chr1:12679045..12679065,- | |short_description=p@chr1:12679045..12679065,- | ||
}} | }} |
Latest revision as of 20:31, 27 July 2015
Short description: | p@chr1:12679045..12679065, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:12679045..12679065, - |
Coexpression cluster: | C3854_anaplastic_Cardiac_Mesothelial_mesothelioma_mesenchymal_Smooth_squamous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.32e-17 | 32 |
mesodermal cell | 1.91e-14 | 121 |
smooth muscle cell | 3.15e-12 | 43 |
smooth muscle myoblast | 3.15e-12 | 43 |
muscle cell | 2.45e-11 | 55 |
muscle precursor cell | 2.33e-10 | 58 |
myoblast | 2.33e-10 | 58 |
multi-potent skeletal muscle stem cell | 2.33e-10 | 58 |
electrically responsive cell | 1.74e-09 | 61 |
electrically active cell | 1.74e-09 | 61 |
embryonic cell | 8.34e-09 | 250 |
smooth muscle cell of the subclavian artery | 9.60e-09 | 5 |